iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Zma-135753

Ensembl Protein ID

Zm00001d035008_T001

UniProt Accession

C0PIM9; C0PIM9_MAIZE

Genbank Protein ID

ACN35045.1; AQK78088.1; AQK78091.1

Protein Name

RING/FYVE/PHD-type zinc finger family protein

Genbank Nucleotide ID

BT068148; CM000782; CM000782

Gene Name

ZEAMMB73_Zm00001d035008

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d035008	Zm00001d035008_T002	Zm00001d035008_T002
Zm00001d035008	Zm00001d035008_T001	Zm00001d035008_T001
Zm00001d035008	Zm00001d035008_T008	Zm00001d035008_T008
Zm00001d035008	Zm00001d035008_T004	Zm00001d035008_T004
Zm00001d035008	Zm00001d035008_T007	Zm00001d035008_T007

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	5.60e-20	73.3	303	349

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           +C+ Cg++ ++ k  + C++C+ ++H+ Clkl+++ee p +  w+Cp+C 
   Q: 303  ICKDCGRKADS-KGRIICDRCEAAYHVSCLKLAIDEEAPAK--WYCPSCV 349
           56667777664.4899*************************..******7 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MACDGAARGR PPKRPASGGL AQPNVVTYKR RRRGTGANAG HSAVTSGPDP AEMSAVVHAI 60
DSQQGGRQTL GRHWRNWRDT LEGVLQSTAG KQGSGGIQSC IRAALRFSGC PPTEHGNLAH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTGGACA GCCGCTTCGG CTTCGCTTCA TCCTCCCCCC TCCCACCCCA ACTCCTCGTC 60
CCGCTCCGGC GTGCGTTTCC TTTCCCGGCT TGGGTTGCCC ACCGAGATCA CCCCCCTCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

zma:100383733

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000842	Aegilops tauschii	53.41	8.00e-121	426.00
IUUC-Bdi-014741	Brachypodium distachyon	49.82	1.00e-138	486.00
IUUC-Bol-016121	Brassica oleracea	34.46	1.00e-55	210.00
IUUC-Bra-018006	Brassica rapa	34.07	1.00e-58	219.00
IUUC-Gma-044138	Glycine max	31.21	2.00e-64	239.00
IUUC-Hvu-047140	Hordeum vulgare	51.20	2.00e-139	489.00
IUUC-Lpe-051590	Leersia perrieri	48.65	5.00e-121	428.00
IUUC-Mtr-058493	Medicago truncatula	32.08	8.00e-64	238.00
IUUC-Oba-075978	Oryza barthii	50.27	8.00e-138	483.00
IUUC-Obr-076162	Oryza brachyantha	51.18	2.00e-134	472.00
IUUC-Ogu-078286	Oryza glumaepatula	51.02	6.00e-138	483.00
IUUC-Oin-079536	Oryza indica	50.27	6.00e-138	483.00
IUUC-Olo-081087	Oryza longistaminata	50.84	8.00e-137	481.00
IUUC-Ome-081892	Oryza meridionalis	49.73	4.00e-138	484.00
IUUC-Oni-082124	Oryza nivara	50.44	2.00e-138	485.00
IUUC-Opu-084017	Oryza punctata	48.50	7.00e-135	474.00
IUUC-Oru-084542	Oryza rufipogon	50.44	2.00e-137	481.00
IUUC-Osa-086025	Oryza sativa	50.44	2.00e-137	481.00
IUUC-Pop-099385	Populus trichocarpa	32.85	1.00e-67	250.00
IUUC-Ppe-101709	Prunus persica	34.51	7.00e-73	268.00
IUUC-Sit-110064	Setaria italica	71.97	0.00e+00	784.00
IUUC-Sly-111296	Solanum lycopersicum	32.91	5.00e-61	228.00
IUUC-Stu-112523	Solanum tuberosum	39.26	2.00e-40	159.00
IUUC-Sbi-113816	Sorghum bicolor	78.76	0.00e+00	741.00
IUUC-Tca-120988	Theobroma cacao	34.85	6.00e-76	278.00
IUUC-Tae-124906	Triticum aestivum	52.08	3.00e-140	491.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence