iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114567

UUCD1 version

UUC-SoB-00634

Ensembl Protein ID

Sb03g038360.1

UniProt Accession

A0A1B6Q6T7; A0A1B6Q6T7_SORBI

Genbank Protein ID

KXG33626.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G339500

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g038360	Sb03g038360.1	Sb03g038360.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.80e-31	108.8	295	367

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpI+l++Mr+Pvv++sG+tydr+sI +w++sg++tcP+t+q lt  +lvPn++l++li +wc en++
   Q: 295  PPPDFRCPITLDIMREPVVVASGQTYDRESIFRWFDSGKSTCPKTGQVLTVLELVPNKALKNLIAKWCRENGV 367
           699*******************************************************************986 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAMPNPRAVL TSAPSPPAAC SSSWSAAAEF MAPATPPSPS DGELLRSLHR LARDLSATAA 60
ETPAPFLRAA LASITRRSRL LAAAFDDLVL CAAAAEEGMP RSASLCLREV LLVLQRFKAL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTGTCTTCGC CTCGCCGCTC CGCCATCGTA CGCACGCCAT CCCCACTAAA CCAGCCGTTT 60
CTGTAGGTGT TAGTTATACC ACGCTCGGCA GCTGCTGTTC CAACTCCAAT GGCCATGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000493	Aegilops tauschii	84.01	5.00e-130	456.00
IUUC-Atr-002566	Amborella trichopoda	41.95	2.00e-101	362.00
IUUC-Aly-005828	Arabidopsis lyrata	43.11	9.00e-119	419.00
IUUC-Ath-007101	Arabidopsis thaliana	43.13	2.00e-118	419.00
IUUC-Bdi-014833	Brachypodium distachyon	79.37	0.00e+00	754.00
IUUC-Bol-015511	Brassica oleracea	43.13	7.00e-119	420.00
IUUC-Bra-017197	Brassica rapa	43.57	2.00e-119	422.00
IUUC-Lpe-051702	Leersia perrieri	84.01	0.00e+00	810.00
IUUC-Mtr-058241	Medicago truncatula	43.45	5.00e-106	377.00
IUUC-Mac-065033	Musa acuminata	52.85	2.00e-136	478.00
IUUC-Oba-075156	Oryza barthii	78.85	0.00e+00	845.00
IUUC-Obr-076747	Oryza brachyantha	85.16	0.00e+00	697.00
IUUC-Ogl-076933	Oryza glaberrima	84.31	0.00e+00	856.00
IUUC-Ogu-077964	Oryza glumaepatula	84.16	0.00e+00	854.00
IUUC-Oin-079937	Oryza indica	84.16	0.00e+00	855.00
IUUC-Oni-082444	Oryza nivara	84.16	0.00e+00	855.00
IUUC-Opu-083588	Oryza punctata	83.63	0.00e+00	891.00
IUUC-Oru-084945	Oryza rufipogon	84.16	0.00e+00	853.00
IUUC-Osa-085986	Oryza sativa	84.16	0.00e+00	853.00
IUUC-Pop-099292	Populus trichocarpa	45.92	2.00e-133	468.00
IUUC-Ppe-101643	Prunus persica	46.55	2.00e-131	462.00
IUUC-Sit-110652	Setaria italica	92.90	0.00e+00	978.00
IUUC-Sly-111346	Solanum lycopersicum	44.55	2.00e-126	445.00
IUUC-Stu-112435	Solanum tuberosum	43.87	3.00e-123	434.00
IUUC-Tca-121203	Theobroma cacao	46.78	1.00e-135	476.00
IUUC-Tae-123409	Triticum aestivum	79.35	0.00e+00	789.00
IUUC-Vvi-131545	Vitis vinifera	44.50	3.00e-121	428.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence