iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006262

Ensembl Protein ID

fgenesh1_pm.C_scaffold_5001870

UniProt Accession

D7LW43; D7LW43_ARALL

Genbank Protein ID

EFH54481.1

Protein Name

Rhomboid family protein

Genbank Nucleotide ID

GL348717

Gene Name

RBL15; ARALYDRAFT_324326

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh1_pm.C_scaffold_5001870	fgenesh1_pm.C_scaffold_5001870	fgenesh1_pm.C_scaffold_5001870

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	4.60e-07	30.4	363	400

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
            e+++++lv+MGFdr ++  aL+aa+ +l +Ave L++
   Q: 363  PEEQIQKLVAMGFDRTQVEVALAAADDDLTVAVEILMS 400
           699*********************************97 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MRPNIVTEAG VQTRVGQWWN AIPFLTSSVV VVCGVIYLIC LLTGYDTFYE VCFLPSAIIS 60
RFQVYRFYTA IIFHGSLLHV LFNMMALVPM GSELERIMGS VRLLYLTILL ATTNAILHLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGGCCGA ACATTGTTAC CGAGGTGAGA TCTGCTCAAT TTCCCGCTTT GCTTGCTTAT 60
TATCCTTGAT CTTAATCAGA AAAATTGCTG AGGTTTTCAC TTAATTTGAT TACCAAGAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR022764--Peptidase_S54_rhomboid_dom
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF01694--Rhomboid
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0004252--F:serine-type endopeptidase activity

KEGG

aly:ARALYDRAFT_324326

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003104	Amborella trichopoda	60.79	1.00e-139	489.00
IUUC-Aca-004494	Anolis carolinensis	33.93	5.00e-03	34.70
IUUC-Ath-006650	Arabidopsis thaliana	97.46	0.00e+00	720.00
IUUC-Afl-008583	Aspergillus flavus	26.46	1.00e-06	46.20
IUUC-Bgr-012264	Blumeria graminis	24.45	3.00e-09	55.10
IUUC-Bci-013845	Botrytis cinerea	24.81	1.00e-09	55.80
IUUC-Bdi-014166	Brachypodium distachyon	59.37	5.00e-133	466.00
IUUC-Bol-015488	Brassica oleracea	89.47	0.00e+00	697.00
IUUC-Bra-017302	Brassica rapa	90.69	0.00e+00	721.00
IUUC-Cre-022648	Chlamydomonas reinhardtii	40.77	6.00e-38	150.00
IUUC-Cme-027293	Cyanidioschyzon merolae	26.72	9.00e-17	80.50
IUUC-Dse-031546	Dothistroma septosporum	25.52	5.00e-08	50.40
IUUC-Ete-032413	Echinops telfairi	37.50	1.40e+00	28.10
IUUC-Fox-037841	Fusarium oxysporum	31.03	3.00e-06	44.70
IUUC-Fso-038300	Fusarium solani	28.66	6.00e-10	56.60
IUUC-Gma-043194	Glycine max	70.12	7.00e-158	549.00
IUUC-Hvu-047778	Hordeum vulgare	59.17	5.00e-131	459.00
IUUC-Itr-048333	Ictidomys tridecemlineatus	24.66	5.00e-05	40.80
IUUC-Lpe-051525	Leersia perrieri	60.69	3.00e-141	493.00
IUUC-Mtr-058025	Medicago truncatula	70.12	2.00e-158	551.00
IUUC-Mac-064802	Musa acuminata	60.69	1.00e-138	485.00
IUUC-Oba-075871	Oryza barthii	56.97	2.00e-118	418.00
IUUC-Obr-076568	Oryza brachyantha	60.44	4.00e-141	493.00
IUUC-Ogl-077534	Oryza glaberrima	59.41	3.00e-128	450.00
IUUC-Ogu-078204	Oryza glumaepatula	56.72	4.00e-118	417.00
IUUC-Oin-079209	Oryza indica	59.41	3.00e-128	450.00
IUUC-Olo-080827	Oryza longistaminata	44.88	2.00e-34	138.00
IUUC-Oni-082642	Oryza nivara	52.32	1.00e-101	362.00
IUUC-Opu-083685	Oryza punctata	52.31	1.00e-109	389.00
IUUC-Oru-085021	Oryza rufipogon	52.32	1.00e-101	362.00
IUUC-Osa-086297	Oryza sativa	59.41	3.00e-128	450.00
IUUC-Olu-087599	Ostreococcus lucimarinus	31.15	4.00e-26	111.00
IUUC-Pno-095121	Phaeosphaeria nodorum	24.07	8.00e-08	49.30
IUUC-Ppa-095438	Physcomitrella patens	45.61	2.00e-97	348.00
IUUC-Pop-099200	Populus trichocarpa	70.24	7.00e-160	556.00
IUUC-Ppe-101907	Prunus persica	67.00	2.00e-158	551.00
IUUC-Sha-107118	Sarcophilus harrisii	35.48	5.70e-01	27.30
IUUC-Sja-107839	Schizosaccharomyces japonicus	28.57	1.00e-05	43.10
IUUC-Ssl-108652	Sclerotinia sclerotiorum	25.28	1.00e-09	56.20
IUUC-Smo-109221	Selaginella moellendorffii	46.28	1.00e-86	312.00
IUUC-Sit-110586	Setaria italica	61.48	4.00e-142	496.00
IUUC-Sly-111682	Solanum lycopersicum	65.13	1.00e-145	508.00
IUUC-Stu-112146	Solanum tuberosum	65.45	1.00e-144	504.00
IUUC-Sbi-114385	Sorghum bicolor	60.89	3.00e-142	497.00
IUUC-Ssc-115544	Sus scrofa	27.49	3.00e-10	58.50
IUUC-Tca-120985	Theobroma cacao	68.12	9.00e-166	575.00
IUUC-Tvi-122530	Trichoderma virens	27.05	8.00e-09	53.10
IUUC-Tae-125293	Triticum aestivum	59.90	3.00e-132	464.00
IUUC-Tur-126741	Triticum urartu	65.43	8.00e-73	266.00
IUUC-Ttr-128782	Tursiops truncatus	27.56	1.00e-10	60.10
IUUC-Vvi-131200	Vitis vinifera	65.86	3.00e-150	524.00
IUUC-Yli-134620	Yarrowia lipolytica	25.86	2.00e-11	62.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence