iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057847

Ensembl Protein ID

KEH36544

UniProt Accession

A0A072V3E7; A0A072V3E7_MEDTR

Genbank Protein ID

KEH36544.1

Protein Name

E3 ubiquitin-protein ligase RMA1H1-like protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g013550

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g013550	KEH36544	KEH36544

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.80e-06	28.0	27	88
E3 activity/RING/RING	1.10e-07	33.7	29	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 6    flCpIslelMrdPvvlpsGitydrssIekwlasggk.........tcPvtrqplteedlvPn 58
           f C I l+  ++Pvv+ +G+ y   +I kwl  +           +cPv+++ ++++++vP 
   Q: 27   FDCNICLDFANEPVVTLCGHLYCWPCIYKWLHVQSDdslgsdehpQCPVCKENISHTTMVPL 88
           99*****************************44444456677888***************96 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw....pglknssskefrCPlCr 46
           C iCl+   + p+v+ CgH+++  C++kw     + +  s  + +CP+C+
   Q: 29   CNICLDFANE-PVVTLCGHLYCWPCIYKWlhvqSDDSLGSDEHPQCPVCK 77
           99**998777.999****************98877777899999*****7 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAFEDCFSHE LKTIPNSMSE AEESNGFDCN ICLDFANEPV VTLCGHLYCW PCIYKWLHVQ 60
SDDSLGSDEH PQCPVCKENI SHTTMVPLYG RGGHTPPSGK SSCCDDNFVP PRPTASGAQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TATCTATCTA GCACTATATA GAGACAGAAA CACTTGTTGT GTCTTTATTC ATTTGTTGTT 60
GCTTACATTC AATAAACTTC TTAGAAAGAA AGCCAAAAGC TGTTCTCTTT TGTATTTATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0436--Ligase
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_2g013550

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Gma-044047	Glycine max	65.07	3.00e-78	283.00
IUUC-Opu-083549	Oryza punctata	36.40	2.00e-25	108.00
IUUC-Pop-099091	Populus trichocarpa	57.14	1.00e-63	235.00
IUUC-Ppe-101989	Prunus persica	52.16	3.00e-61	227.00
IUUC-Stu-112310	Solanum tuberosum	50.00	6.00e-50	189.00
IUUC-Tca-121250	Theobroma cacao	53.31	8.00e-57	212.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence