iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121845

Ensembl Protein ID

EOY17719

UniProt Accession

A0A061FT29; A0A061FT29_THECC

Genbank Protein ID

EOY17719.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001888

Gene Name

TCM_042465

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_042465	EOY17719	EOY17719

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-31	109.6	349	421

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p+ef+CpIsl+lM+dPv+++sG+ty+r+sI++w+++g++tcP+ +q+l +  l+Pn++l++l+++wc+en++
   Q: 349  IPDEFRCPISLDLMKDPVIVASGHTYERNSIAQWINTGRHTCPKSGQRLIHMALIPNYALKSLVHQWCQENNI 421
           8*********************************************************************976 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MVHLLASTLL SFSVKCTKRS SQDFHAKNDN KEVCSKLPNF VIKPLAWKKW WQTASGTDSL 60
LERNSVMELA LPPVMASSGF LPSGSLLQSL IHVSNEVASM EKLPFVQVRN ISTMMRRIKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAGAATTAG TAATAATATA ATTAAATTAG TAAAATATTT TTCAAAAAAA ATTAACACGT 60
CGTATTCTGA TAACGAATGT ATCTTTTTTA AACATTCATT ATTCTTATTT TTTATATATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002723	Amborella trichopoda	51.27	4.00e-164	570.00
IUUC-Cel-018336	Caenorhabditis elegans	33.99	3.00e-12	67.40
IUUC-Gma-042912	Glycine max	65.36	0.00e+00	722.00
IUUC-Lch-049908	Latimeria chalumnae	45.00	4.00e-09	56.20
IUUC-Mtr-058278	Medicago truncatula	69.26	0.00e+00	884.00
IUUC-Ppa-095610	Physcomitrella patens	45.72	2.00e-150	525.00
IUUC-Pop-099478	Populus trichocarpa	76.63	0.00e+00	930.00
IUUC-Ppe-101201	Prunus persica	74.64	0.00e+00	979.00
IUUC-Smo-109110	Selaginella moellendorffii	43.40	3.00e-149	521.00
IUUC-Sly-111580	Solanum lycopersicum	69.43	0.00e+00	750.00
IUUC-Stu-112508	Solanum tuberosum	68.68	0.00e+00	900.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence