iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bta-013216

Ensembl Protein ID

ENSBTAP00000040225.3

UniProt Accession

F1N7W4; F1N7W4_BOVIN

Genbank Protein ID

ENSBTAP00000040225

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02049455

Gene Name

CBX4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000009782.5	ENSBTAT00000042590.3	ENSBTAP00000040225.3

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/Other	71.90	1.00e-180	630.00	IUUC-Hsa-046374
E3 activity/Other	72.78	0.00e+00	631.00	IUUC-Mmu-063344

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Bos taurus

Protein Sequence
(Fasta)

MELPAVGEHV FAVESIEKKR IRKGRVEYLV KWRGWSPKYN TWEPEENILD PRLLIAFQNR 60
ERQEQLMGYR KRGPKPKPLV VQVPTFARRS NVLTGLQDSS ADNRAKLELG GQGKGQGHQY 120

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Nucleotide Sequence
(Fasta)

ATGGAGCTGC CAGCTGTTGG CGAGCACGTC TTCGCGGTGG AGAGCATCGA GAAGAAGCGG 60
ATCCGCAAGG TAGGGCGGCG CGGGGGCGGC GGCGAGGCGG CGGGGGAGCG GCAGCCGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome

Interpro

IPR033773--CBX7_C
IPR000953--Chromo/chromo_shadow_dom
IPR017984--Chromo_dom_subgr
IPR023780--Chromo_domain
IPR016197--Chromodomain-like
IPR023779--Chromodomain_CS

PROSITE

PS00598--CHROMO_1
PS50013--CHROMO_2

Pfam

PF17218--CBX7_C
PF00385--Chromo

PRINTS

PR00504--CHROMODOMAIN

SMART

SM00298--CHROMO

Gene Ontology

GO:0016604--C:nuclear body
GO:0035102--C:PRC1 complex
GO:0003682--F:chromatin binding
GO:0003727--F:single-stranded RNA binding
GO:0044212--F:transcription regulatory region DNA binding
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0016925--P:protein sumoylation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001747	Ailuropoda melanoleuca	83.33	1.00e-88	320.00
IUUC-Atr-003112	Amborella trichopoda	50.98	7.00e-11	61.60
IUUC-Apl-003876	Anas platyrhynchos	55.05	2.00e-48	186.00
IUUC-Aca-004445	Anolis carolinensis	42.21	5.00e-86	311.00
IUUC-Aly-006366	Arabidopsis lyrata	53.33	1.00e-11	64.30
IUUC-Ath-006608	Arabidopsis thaliana	53.33	1.00e-11	64.30
IUUC-Ame-010980	Astyanax mexicanus	72.19	2.00e-68	253.00
IUUC-Bdi-014604	Brachypodium distachyon	39.74	2.00e-12	66.60
IUUC-Bol-015449	Brassica oleracea	55.56	2.00e-12	67.00
IUUC-Bra-017229	Brassica rapa	55.56	2.00e-12	67.00
IUUC-Cja-018821	Callithrix jacchus	82.35	2.00e-103	369.00
IUUC-Cfa-020457	Canis familiaris	85.31	5.00e-70	258.00
IUUC-Cpo-021550	Cavia porcellus	68.18	3.00e-153	535.00
IUUC-Csa-024090	Chlorocebus sabaeus	87.36	1.00e-110	393.00
IUUC-Dre-027769	Danio rerio	68.93	8.00e-68	251.00
IUUC-Dno-028987	Dasypus novemcinctus	76.42	1.00e-68	253.00
IUUC-Eca-033419	Equus caballus	85.28	2.00e-60	225.00
IUUC-Fca-035513	Felis catus	70.63	2.00e-143	502.00
IUUC-Gmo-038639	Gadus morhua	52.11	9.00e-59	221.00
IUUC-Gga-040221	Gallus gallus	52.30	1.00e-125	442.00
IUUC-Gac-042105	Gasterosteus aculeatus	69.32	4.00e-63	235.00
IUUC-Ggo-044433	Gorilla gorilla	72.39	2.00e-90	326.00
IUUC-Hsa-046374	Homo sapiens	87.36	8.00e-111	394.00
IUUC-Hvu-047395	Hordeum vulgare	42.86	4.00e-09	55.80
IUUC-Itr-048523	Ictidomys tridecemlineatus	84.78	4.00e-111	395.00
IUUC-Lch-050606	Latimeria chalumnae	45.02	9.00e-106	377.00
IUUC-Loc-052513	Lepisosteus oculatus	74.60	5.00e-71	260.00
IUUC-Laf-053583	Loxodonta africana	58.21	4.00e-32	131.00
IUUC-Mcc-055070	Macaca mulatta	83.41	2.00e-68	253.00
IUUC-Meu-055954	Macropus eugenii	72.05	3.00e-86	311.00
IUUC-Mga-059417	Meleagris gallopavo	44.61	7.00e-74	271.00
IUUC-Mmr-060774	Microcebus murinus	73.05	2.00e-163	569.00
IUUC-Mdo-062825	Monodelphis domestica	61.28	1.00e-144	506.00
IUUC-Mmu-063344	Mus musculus	72.78	1.00e-167	582.00
IUUC-Mpu-066193	Mustela putorius furo	72.35	2.00e-146	512.00
IUUC-Mlu-067939	Myotis lucifugus	70.89	1.00e-146	512.00
IUUC-Nle-069889	Nomascus leucogenys	78.79	2.00e-28	119.00
IUUC-Ont-071531	Oreochromis niloticus	68.57	3.00e-64	239.00
IUUC-Ocu-074528	Oryctolagus cuniculus	56.96	4.00e-83	301.00
IUUC-Oba-075909	Oryza barthii	37.93	8.00e-12	64.70
IUUC-Obr-076678	Oryza brachyantha	36.59	2.00e-11	63.50
IUUC-Ogl-077833	Oryza glaberrima	37.93	1.00e-11	64.30
IUUC-Ogu-078599	Oryza glumaepatula	37.93	1.00e-11	64.30
IUUC-Oni-082564	Oryza nivara	37.93	9.00e-12	64.70
IUUC-Opu-083875	Oryza punctata	37.93	9.00e-12	64.70
IUUC-Oru-084465	Oryza rufipogon	37.93	8.00e-12	64.70
IUUC-Osa-085995	Oryza sativa	37.93	9.00e-12	64.70
IUUC-Ola-086942	Oryzias latipes	40.64	1.00e-73	270.00
IUUC-Oga-088509	Otolemur garnettii	74.06	0.00e+00	629.00
IUUC-Oar-089503	Ovis aries	75.72	3.00e-167	581.00
IUUC-Ptr-091416	Pan troglodytes	87.36	8.00e-111	394.00
IUUC-Pan-092459	Papio anubis	87.36	1.00e-110	393.00
IUUC-Psi-093173	Pelodiscus sinensis	46.55	3.00e-81	295.00
IUUC-Pfo-096252	Poecilia formosa	38.78	7.00e-77	281.00
IUUC-Pab-097991	Pongo abelii	83.89	4.00e-69	255.00
IUUC-Pca-100744	Procavia capensis	65.78	7.00e-158	550.00
IUUC-Pte-104285	Pyrenophora teres	45.71	3.00e-03	35.40
IUUC-Rno-105878	Rattus norvegicus	96.15	2.00e-102	365.00
IUUC-Sha-107505	Sarcophilus harrisii	60.90	5.00e-106	377.00
IUUC-Spo-108161	Schizosaccharomyces pombe	27.54	1.00e-03	38.90
IUUC-Sit-110439	Setaria italica	53.33	2.00e-11	63.50
IUUC-Sly-111669	Solanum lycopersicum	47.83	6.00e-12	65.50
IUUC-Stu-112251	Solanum tuberosum	39.44	4.00e-12	66.20
IUUC-Ssc-115965	Sus scrofa	76.96	7.00e-173	600.00
IUUC-Tgu-117367	Taeniopygia guttata	54.61	2.00e-69	256.00
IUUC-Tru-118259	Takifugu rubripes	68.39	2.00e-63	236.00
IUUC-Tni-120129	Tetraodon nigroviridis	58.61	6.00e-66	244.00
IUUC-Tae-124603	Triticum aestivum	44.29	3.00e-09	56.20
IUUC-Ttr-128982	Tursiops truncatus	71.46	2.00e-154	539.00
IUUC-Vvi-131282	Vitis vinifera	46.81	5.00e-11	62.00
IUUC-Xtr-132586	Xenopus tropicalis	52.93	1.00e-86	313.00
IUUC-Xma-133102	Xiphophorus maculatus	39.05	3.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence