iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058545

Ensembl Protein ID

KEH44419

UniProt Accession

A0A072VR14; A0A072VR14_MEDTR

Genbank Protein ID

KEH44419.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g114620

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g114620	KEH44419	KEH44419

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	30.5	264	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+C+e++   +   + lpCgH +h dC+  w       s++ +CP+Cr
   Q: 264  CAVCKEMLgvgE-MAKRLPCGHEYHGDCIVPW------LSTRNSCPICR 305
           ******997752.3667***************......**********8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MSETPSQPPL TTTTETLPPY WCYHCDKRVS VETVANLPDL ICGDCKNGFV ESIPTPSRSR 60
SPSSSSDDPN FGSQFLQVLR LIAQSSRDDD ASPPPPPSRS PENDFLRIEL GGWDHDDEDN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGAAAGATT CCTTGTATGA AATACTAATT CGATAATATT ATTATATGAA GGACCACTAT 60
CGAAACTAAT ATTGTTCTAT CTTTTACATA ACAAAAAATC AATTGAAGCC ACAACCACTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005737--C:cytoplasm
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

mtr:MTR_1g114620

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006264	Arabidopsis lyrata	62.75	4.00e-49	187.00
IUUC-Ath-007318	Arabidopsis thaliana	64.29	3.00e-49	187.00
IUUC-Bol-015980	Brassica oleracea	59.03	1.00e-30	126.00
IUUC-Bra-017830	Brassica rapa	56.67	6.00e-38	150.00
IUUC-Cin-025410	Ciona intestinalis	43.42	4.00e-14	69.70
IUUC-Gma-042770	Glycine max	82.00	1.00e-102	365.00
IUUC-Ppe-101680	Prunus persica	68.46	3.00e-56	211.00
IUUC-Sly-110882	Solanum lycopersicum	74.64	3.00e-57	214.00
IUUC-Stu-112141	Solanum tuberosum	73.91	2.00e-57	215.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence