iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044073

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000851

Gene Name

LOC100820501; GLYMA_18G300300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA18G53836	GLYMA18G53836.1	GLYMA18G53836.1
GLYMA18G53836	GLYMA18G53836.2	GLYMA18G53836.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-22	81.5	613	682

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawce 70
           +p+ef+Cp++++l+++Pv+l++G+t++r++I+ w+++g++tcPvt+ +l+  ++   nl l+rli+ w +
   Q: 613  IPHEFICPLTGNLFEEPVTLETGQTFEREAIKAWFEKGNRTCPVTGNTLECVTMpFTNLILKRLIDTWKS 682
           8************************************************877777*************86 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MASSLEELLA KEGFKGIRRV TRSRSSFHYG ASSEPLHSLD GRFSVSSERI RTQRTKSDAS 60
RYQISSGQLK TDNDTAMNRR SRDNLFLRDK MDQRLKNSSI DTDSGRGVDT NSSEYMPRNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTGTTTCTT ACTTTTGTTT TTAATTAATC AACTTGTTCA AAAAACTCTT CTAATGTTCT 60
ATATCATTCA TGCCTTTCAC CAATCAACAT CTCTATCATT CTCCTTAATT TGTTCTCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD
IPR007527--Znf_SWIM

PROSITE

PS51698--U_BOX
PS50966--ZF_SWIM

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

KEGG

gmx:100820501

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	40.17	6.00e-87	316.00
IUUC-Bdi-014999	Brachypodium distachyon	32.16	2.00e-50	194.00
IUUC-Hvu-047722	Hordeum vulgare	35.85	4.00e-56	213.00
IUUC-Lpe-051567	Leersia perrieri	37.37	3.00e-61	230.00
IUUC-Mtr-058670	Medicago truncatula	64.26	0.00e+00	1241.00
IUUC-Oba-075449	Oryza barthii	33.54	3.00e-57	216.00
IUUC-Obr-076588	Oryza brachyantha	35.38	5.00e-59	223.00
IUUC-Ogu-078984	Oryza glumaepatula	33.33	6.00e-60	226.00
IUUC-Ome-081747	Oryza meridionalis	34.24	3.00e-59	223.00
IUUC-Oni-082227	Oryza nivara	33.75	3.00e-56	213.00
IUUC-Opu-083803	Oryza punctata	33.30	2.00e-103	370.00
IUUC-Oru-084717	Oryza rufipogon	33.96	4.00e-58	219.00
IUUC-Pop-099189	Populus trichocarpa	45.36	0.00e+00	805.00
IUUC-Ppe-101493	Prunus persica	47.83	2.00e-114	407.00
IUUC-Sit-110010	Setaria italica	30.79	6.00e-43	169.00
IUUC-Stu-112239	Solanum tuberosum	45.13	4.00e-101	362.00
IUUC-Sbi-113947	Sorghum bicolor	32.22	2.00e-55	210.00
IUUC-Tca-121435	Theobroma cacao	45.64	0.00e+00	805.00
IUUC-Tae-125606	Triticum aestivum	35.98	4.00e-64	239.00
IUUC-Tur-126526	Triticum urartu	35.13	3.00e-51	196.00
IUUC-Vvi-130964	Vitis vinifera	46.38	0.00e+00	818.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence