iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130964

UUCD1 version

UUC-ViV-00074

Ensembl Protein ID

VIT_06s0004g01260.t01

UniProt Accession

D7SLC9; D7SLC9_VITVI

Genbank Protein ID

CBI16457.3

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN594951

Gene Name

VIT_06s0004g01260

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0004g01260	VIT_06s0004g01260.t01	VIT_06s0004g01260.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.40e-22	78.5	608	679

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedl.vPnltlrrliqawceen 72
           +p++f+Cp+++ l++dPv++++G+t++r +I++w+++g++ cPvt++ l+   +   n  l+r+i+ w +en
   Q: 608  IPQDFICPLTGRLFEDPVTIETGQTFERHAIREWFNQGNRNCPVTGKALEGLGVpLTNFILKRVIDGWKSEN 679
           8************************************************999999*************9987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MASSLEDLLA EEGFQGRRLK TTPRPSFASR AVSMPLYPFR INCKADAGSV VKIQTARTRS 60
SVSRYNSEGE APPTNRVKGR KQKDSLIRRE KLDREPKKEL NKRFEERETN DVFEDFPGNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCATCTT CATTGGAAGA CCTTCTTGCA GAGGAGGGGT TTCAAGGAAG GAGACTGAAG 60
ACAACACCTA GACCTTCCTT TGCATCAAGG GCTGTAAGTA TGCCACTTTA CCCTTTCCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003133	Amborella trichopoda	40.64	0.00e+00	703.00
IUUC-Bdi-014999	Brachypodium distachyon	35.92	1.00e-65	244.00
IUUC-Gma-044073	Glycine max	46.76	0.00e+00	811.00
IUUC-Hvu-047722	Hordeum vulgare	40.24	8.00e-74	271.00
IUUC-Lpe-051567	Leersia perrieri	42.47	6.00e-74	271.00
IUUC-Mtr-058670	Medicago truncatula	46.95	0.00e+00	744.00
IUUC-Mac-065130	Musa acuminata	38.22	4.00e-141	494.00
IUUC-Oba-075449	Oryza barthii	40.25	1.00e-78	287.00
IUUC-Obr-076588	Oryza brachyantha	35.71	1.00e-117	417.00
IUUC-Ogu-078984	Oryza glumaepatula	39.83	3.00e-81	295.00
IUUC-Olo-080563	Oryza longistaminata	41.40	1.00e-44	173.00
IUUC-Ome-081747	Oryza meridionalis	32.60	2.00e-96	346.00
IUUC-Oni-082227	Oryza nivara	40.33	3.00e-77	282.00
IUUC-Opu-083803	Oryza punctata	37.64	2.00e-119	422.00
IUUC-Oru-084717	Oryza rufipogon	40.54	2.00e-79	289.00
IUUC-Osa-085390	Oryza sativa	43.54	2.00e-47	182.00
IUUC-Pop-099189	Populus trichocarpa	50.99	0.00e+00	978.00
IUUC-Ppe-101493	Prunus persica	49.26	0.00e+00	869.00
IUUC-Sit-110010	Setaria italica	43.81	2.00e-43	169.00
IUUC-Stu-112239	Solanum tuberosum	54.41	6.00e-137	479.00
IUUC-Sbi-113947	Sorghum bicolor	42.78	2.00e-43	170.00
IUUC-Tca-121435	Theobroma cacao	53.99	0.00e+00	1033.00
IUUC-Tae-125606	Triticum aestivum	40.81	1.00e-80	293.00
IUUC-Tur-126526	Triticum urartu	38.83	7.00e-66	244.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence