iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0003s20350	POPTR_0003s20350.3	POPTR_0003s20350.3
POPTR_0003s20350	POPTR_0003s20350.5	POPTR_0003s20350.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.60e-06	29.7	198	238

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C iC+ ++k+g   ++lpC+H++ha C  +w       s +  CP+C
   Q: 198  CVICQMEYKRGdrQITLPCKHIYHAGCGTRW------LSINKACPIC 238
           ****999966644567***************......********** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNWNTLMDGH SMNASYPYNS AGSFIEYFEG LTYDHVNFIF NGASHVQDSV YPSMNANFYK 60
FGLSPPGSAS YYDPAYVYEV YNHGLRNEEY RRPPSENSST ATNERTSRVN TEWEVNENRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGCTAAACAG TAATTCAGTA AGAAAAGTGC AACGCTCCAA TAAGGGAGCC ACGACGCTCG 60
CCCAGCCCAC ATTCACTCAC ACTTCCTCTA AGAACAGAGA AAAACAGAGA GGACAAAGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0048437--P:floral organ development
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0003s20350g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002639	Amborella trichopoda	51.63	2.00e-61	228.00
IUUC-Gma-043316	Glycine max	67.60	5.00e-96	343.00
IUUC-Mtr-058603	Medicago truncatula	65.23	4.00e-93	333.00
IUUC-Olu-087709	Ostreococcus lucimarinus	42.55	5.00e-17	78.20
IUUC-Ppe-101397	Prunus persica	68.40	8.00e-101	358.00
IUUC-Sly-111293	Solanum lycopersicum	58.47	2.00e-79	288.00
IUUC-Stu-112116	Solanum tuberosum	58.47	3.00e-79	287.00
IUUC-Tca-121840	Theobroma cacao	73.39	3.00e-103	367.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence