iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113823

UUCD1 version

UUC-SoB-00036

Ensembl Protein ID

Sb04g035380.1

UniProt Accession

A0A194YSU0; A0A194YSU0_SORBI

Genbank Protein ID

KXG31241.1; KXG31242.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G323700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g035380	Sb04g035380.1	Sb04g035380.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	6.60e-07	30.6	332	373

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl  +   d+++ lpC H+fh+dC+ kw       + +++CPlC+
   Q: 332  CCICLAKYahNDELRELPCAHCFHKDCVDKW------LKINALCPLCK 373
           *****99988666******************......**********7 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEQATGVSGP EHIIDIPREI GPSASVSRSV GRENHEELNP VDRPSTRALV PALQAPSAIG 60
AVPNAGQTSG TRRNDNYVRR HRSPLNSGLW ISIEVIVNVS QIVAAIVVLC LSRKEHPQAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAGCTTCT GTTGTTGGGT ACAGAGAAAT ATTTCCTGCC TTTTGAGGAA GACTGCAGAT 60
CTTCTAAATG TGAAATTTGC TTCTTTTCTT GTCTACTCCT GAATGCTGAT GAACTCAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000618	Aegilops tauschii	88.49	0.00e+00	684.00
IUUC-Atr-002558	Amborella trichopoda	54.03	9.00e-106	376.00
IUUC-Aly-005824	Arabidopsis lyrata	62.54	4.00e-100	357.00
IUUC-Ath-007421	Arabidopsis thaliana	62.88	3.00e-101	361.00
IUUC-Bol-015448	Brassica oleracea	63.04	7.00e-101	359.00
IUUC-Bra-017950	Brassica rapa	62.33	1.00e-98	352.00
IUUC-Gma-043870	Glycine max	56.00	5.00e-124	436.00
IUUC-Hvu-047447	Hordeum vulgare	87.78	0.00e+00	695.00
IUUC-Lpe-050851	Leersia perrieri	85.29	0.00e+00	666.00
IUUC-Mtr-058402	Medicago truncatula	63.08	1.00e-102	365.00
IUUC-Mac-065469	Musa acuminata	63.66	4.00e-131	460.00
IUUC-Oba-075730	Oryza barthii	84.79	0.00e+00	672.00
IUUC-Obr-076189	Oryza brachyantha	84.29	0.00e+00	667.00
IUUC-Ogl-077454	Oryza glaberrima	84.79	0.00e+00	672.00
IUUC-Ogu-078902	Oryza glumaepatula	85.04	0.00e+00	674.00
IUUC-Oin-079324	Oryza indica	84.79	0.00e+00	672.00
IUUC-Olo-080365	Oryza longistaminata	85.04	0.00e+00	674.00
IUUC-Oni-082514	Oryza nivara	84.79	0.00e+00	672.00
IUUC-Opu-083647	Oryza punctata	84.54	0.00e+00	672.00
IUUC-Oru-084575	Oryza rufipogon	82.54	0.00e+00	642.00
IUUC-Ppa-095745	Physcomitrella patens	54.91	1.00e-82	299.00
IUUC-Pop-099755	Populus trichocarpa	59.79	9.00e-122	429.00
IUUC-Ppe-101804	Prunus persica	58.37	2.00e-118	418.00
IUUC-Sce-106136	Saccharomyces cerevisiae	31.65	2.00e-07	50.40
IUUC-Smo-108799	Selaginella moellendorffii	58.68	5.00e-92	330.00
IUUC-Sit-109918	Setaria italica	96.01	0.00e+00	702.00
IUUC-Sly-111768	Solanum lycopersicum	53.85	2.00e-103	368.00
IUUC-Stu-112684	Solanum tuberosum	53.79	2.00e-103	368.00
IUUC-Tca-121516	Theobroma cacao	59.00	5.00e-121	426.00
IUUC-Vvi-131276	Vitis vinifera	63.26	3.00e-104	370.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence