iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tur-125972

Ensembl Protein ID

TRIUR3_29201-P1

UniProt Accession

M7ZY55; M7ZY55_TRIUA

Genbank Protein ID

EMS64581.1

Protein Name

E3 ubiquitin-protein ligase RNF12-B

Genbank Nucleotide ID

KD054537

Gene Name

TRIUR3_29201

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TRIUR3_29201	TRIUR3_29201-T1	TRIUR3_29201-P1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.6	498	536

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkw.......p 30
           C iCl++++dg   ++lpC+H fh++C+ kw        
   Q: 498  CHICLTEYEDGdqIRSLPCKHEFHLQCVDKWlkeihrrA 536
           99******66666******************44443330 PP

Organism

Triticum urartu

Protein Sequence
(Fasta)

MEPELQNASL RPTFFCFYGG SCEEVVIGEV EEERLRKYEE QCLMKEEEDR KAEEATKRRK 60
ESEEEMLLKK LQGRYVVQAA TRQAERAAAG LDFQPSLSAK DLRHTSEPDP RVHPSSSTIS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGCCTG AGCTCCAAAA TGCCTCACTC CGACCGACAT TTTTTTGTTT TTACGGTGAG 60
TCTGGACTTA GCTTATATCT CTGGTCAAAA TACCAAACTT GAACTAAATA AAAAATAGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF17123--zf-RING_11

SMART

SM00184--RING

Gene Ontology

GO:0016874--F:ligase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000102	Aegilops tauschii	96.87	0.00e+00	694.00
IUUC-Aly-005619	Arabidopsis lyrata	46.91	1.00e-31	130.00
IUUC-Bdi-014055	Brachypodium distachyon	82.06	0.00e+00	684.00
IUUC-Bra-016691	Brassica rapa	46.41	2.00e-33	135.00
IUUC-Gma-044161	Glycine max	61.68	4.00e-30	125.00
IUUC-Hvu-047617	Hordeum vulgare	95.77	0.00e+00	628.00
IUUC-Lpe-051589	Leersia perrieri	48.48	2.00e-31	129.00
IUUC-Mtr-057891	Medicago truncatula	44.61	1.00e-55	209.00
IUUC-Mac-064852	Musa acuminata	52.99	1.00e-58	219.00
IUUC-Oba-075366	Oryza barthii	74.55	3.00e-179	620.00
IUUC-Obr-076890	Oryza brachyantha	75.00	4.00e-166	576.00
IUUC-Ogl-077114	Oryza glaberrima	74.55	3.00e-179	620.00
IUUC-Ogu-078245	Oryza glumaepatula	44.74	3.00e-31	129.00
IUUC-Oin-079221	Oryza indica	75.00	0.00e+00	632.00
IUUC-Olo-080256	Oryza longistaminata	51.47	3.00e-30	125.00
IUUC-Ome-081877	Oryza meridionalis	75.00	0.00e+00	630.00
IUUC-Oni-083035	Oryza nivara	75.00	0.00e+00	632.00
IUUC-Opu-084111	Oryza punctata	75.44	0.00e+00	636.00
IUUC-Oru-084733	Oryza rufipogon	74.78	0.00e+00	630.00
IUUC-Osa-085934	Oryza sativa	76.36	1.00e-157	548.00
IUUC-Ppa-096010	Physcomitrella patens	40.71	8.00e-34	137.00
IUUC-Pop-099775	Populus trichocarpa	56.54	2.00e-47	182.00
IUUC-Ppe-101202	Prunus persica	52.03	1.00e-56	213.00
IUUC-Smo-108790	Selaginella moellendorffii	76.32	2.00e-16	75.90
IUUC-Sit-109942	Setaria italica	70.24	4.00e-152	530.00
IUUC-Sly-111747	Solanum lycopersicum	46.96	2.00e-49	188.00
IUUC-Stu-112633	Solanum tuberosum	46.96	1.00e-46	179.00
IUUC-Tca-121072	Theobroma cacao	52.35	2.00e-62	232.00
IUUC-Tae-125808	Triticum aestivum	99.78	0.00e+00	840.00
IUUC-Vvi-131215	Vitis vinifera	50.00	6.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence