iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Kpa-049235

Ensembl Protein ID

CAY68080

UniProt Accession

C4QXV7; C4QXV7_KOMPG

Genbank Protein ID

CAY68080.1

Protein Name

Component of the core form of RNA polymerase transcription factor TFIIH

Genbank Nucleotide ID

FN392319

Gene Name

PAS_chr1-4_0245

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PAS_chr1-4_0245	CAY68080	CAY68080

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	61.00	1.00e-149	524.00	IUUC-Sce-106434

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Komagataella pastoris

Protein Sequence
(Fasta)

MNDSDDDYLE VDEGIEENDL SFDKKGVARR TRKENQKQKT TANIALKGSN GGYSWEDEYH 60
RSWDIVQEDE AGSLEGIVTG IMEAHKKRFL KNVTPFQRGI IRSMVLVIDF SKVMSEKDLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACGATT CGGACGATGA TTACTTGGAG GTGGATGAGG GCATAGAGGA GAACGATCTT 60
TCCTTTGATA AAAAAGGTGT GGCCCGCCGA ACCCGTAAGG AAAATCAAAA ACAGAAAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007198--Ssl1-like
IPR004595--TFIIH_C1-like_dom
IPR012170--TFIIH_SSL1/p44
IPR002035--VWF_A
IPR013087--Znf_C2H2_type

PROSITE

PS50234--VWFA
PS00028--ZINC_FINGER_C2H2_1

Pfam

PF07975--C1_4
PF04056--Ssl1

SMART

SM01047--C1_4
SM00327--VWA

Gene Ontology

GO:0000439--C:core TFIIH complex
GO:0005675--C:holo TFIIH complex
GO:0000112--C:nucleotide-excision repair factor 3 complex
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0006289--P:nucleotide-excision repair
GO:0070816--P:phosphorylation of RNA polymerase II C-terminal domain
GO:0006366--P:transcription from RNA polymerase II promoter

KEGG

ppa:PAS_chr1-4_0245

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000536	Aegilops tauschii	40.60	5.00e-54	202.00
IUUC-Aml-002041	Ailuropoda melanoleuca	40.59	4.00e-76	276.00
IUUC-Atr-003056	Amborella trichopoda	40.90	6.00e-71	258.00
IUUC-Apl-003464	Anas platyrhynchos	38.73	3.00e-67	246.00
IUUC-Aca-004745	Anolis carolinensis	40.06	1.00e-73	267.00
IUUC-Aly-005559	Arabidopsis lyrata	40.35	1.00e-80	291.00
IUUC-Ath-007556	Arabidopsis thaliana	40.60	1.00e-80	290.00
IUUC-Ago-007851	Ashbya gossypii	62.75	1.00e-157	547.00
IUUC-Acl-008100	Aspergillus clavatus	49.78	3.00e-124	436.00
IUUC-Afl-008649	Aspergillus flavus	55.17	4.00e-22	93.60
IUUC-Afu-009066	Aspergillus fumigatus	48.77	4.00e-127	446.00
IUUC-Ani-009372	Aspergillus nidulans	50.11	5.00e-124	435.00
IUUC-Ang-009726	Aspergillus niger	50.45	4.00e-131	459.00
IUUC-Aor-010135	Aspergillus oryzae	50.11	2.00e-124	436.00
IUUC-Ate-010399	Aspergillus terreus	44.34	4.00e-42	161.00
IUUC-Ame-011618	Astyanax mexicanus	40.25	6.00e-83	298.00
IUUC-Bgr-012154	Blumeria graminis	48.25	1.00e-123	434.00
IUUC-Bta-012353	Bos taurus	40.84	1.00e-78	284.00
IUUC-Bci-013932	Botrytis cinerea	54.31	2.00e-125	439.00
IUUC-Bdi-014391	Brachypodium distachyon	40.94	9.00e-81	291.00
IUUC-Bol-015128	Brassica oleracea	41.28	3.00e-83	299.00
IUUC-Bra-017932	Brassica rapa	40.79	6.00e-83	298.00
IUUC-Cel-018649	Caenorhabditis elegans	31.84	3.00e-55	206.00
IUUC-Cja-018776	Callithrix jacchus	40.59	7.00e-75	271.00
IUUC-Cfa-020584	Canis familiaris	40.59	9.00e-76	275.00
IUUC-Cpo-021300	Cavia porcellus	40.59	7.00e-76	275.00
IUUC-Cre-022657	Chlamydomonas reinhardtii	36.68	4.00e-69	253.00
IUUC-Csa-024092	Chlorocebus sabaeus	40.59	5.00e-76	275.00
IUUC-Cho-024919	Choloepus hoffmanni	40.09	1.00e-34	137.00
IUUC-Cin-025386	Ciona intestinalis	38.01	2.00e-76	277.00
IUUC-Csv-026295	Ciona savignyi	35.85	1.00e-75	274.00
IUUC-Cgl-026612	Colletotrichum gloeosporioides	50.72	2.00e-116	410.00
IUUC-Cne-026956	Cryptococcus neoformans	38.95	1.00e-84	304.00
IUUC-Cme-027150	Cyanidioschyzon merolae	30.40	1.00e-45	175.00
IUUC-Dre-027962	Danio rerio	40.59	6.00e-85	305.00
IUUC-Dno-029979	Dasypus novemcinctus	40.52	3.00e-61	226.00
IUUC-Dse-031405	Dothistroma septosporum	46.27	3.00e-109	386.00
IUUC-Dme-031710	Drosophila melanogaster	36.71	6.00e-74	269.00
IUUC-Ete-032631	Echinops telfairi	38.00	5.00e-67	245.00
IUUC-Eca-034054	Equus caballus	40.46	4.00e-76	276.00
IUUC-Fca-035724	Felis catus	38.37	6.00e-69	252.00
IUUC-Fal-036987	Ficedula albicollis	39.11	2.00e-82	297.00
IUUC-Fox-037692	Fusarium oxysporum	46.58	2.00e-119	420.00
IUUC-Fso-038442	Fusarium solani	46.64	1.00e-114	404.00
IUUC-Gmo-039273	Gadus morhua	38.12	1.00e-77	280.00
IUUC-Ggr-040009	Gaeumannomyces graminis	43.89	4.00e-108	382.00
IUUC-Gga-041089	Gallus gallus	38.37	2.00e-81	293.00
IUUC-Gac-041978	Gasterosteus aculeatus	37.87	7.00e-74	268.00
IUUC-Gma-043371	Glycine max	40.39	6.00e-84	302.00
IUUC-Ggo-044728	Gorilla gorilla	22.07	3.20e-01	31.20
IUUC-Hsa-046001	Homo sapiens	40.35	1.00e-75	274.00
IUUC-Itr-048355	Ictidomys tridecemlineatus	40.10	2.00e-82	296.00
IUUC-Lch-049926	Latimeria chalumnae	38.12	3.00e-77	280.00
IUUC-Lpe-051352	Leersia perrieri	41.44	1.00e-82	297.00
IUUC-Loc-051987	Lepisosteus oculatus	39.11	4.00e-82	296.00
IUUC-Lma-053171	Leptosphaeria maculans	41.67	4.00e-98	350.00
IUUC-Laf-054372	Loxodonta africana	40.10	9.00e-78	281.00
IUUC-Mcc-055108	Macaca mulatta	40.59	5.00e-76	275.00
IUUC-Meu-056855	Macropus eugenii	25.00	1.30e-01	28.10
IUUC-Mor-056990	Magnaporthe oryzae	48.96	1.00e-117	414.00
IUUC-Mtr-058401	Medicago truncatula	40.39	2.00e-82	297.00
IUUC-Mla-059186	Melampsora laricipopulina	46.40	1.00e-103	367.00
IUUC-Mvi-060262	Microbotryum violaceum	41.54	6.00e-92	329.00
IUUC-Mmr-061688	Microcebus murinus	36.88	5.00e-67	245.00
IUUC-Mdo-062154	Monodelphis domestica	40.10	1.00e-80	291.00
IUUC-Mmu-064232	Mus musculus	40.25	1.00e-74	271.00
IUUC-Mac-065091	Musa acuminata	40.25	4.00e-81	293.00
IUUC-Mpu-066747	Mustela putorius furo	37.87	1.00e-64	238.00
IUUC-Mlu-067799	Myotis lucifugus	38.06	4.00e-64	236.00
IUUC-Nfi-068371	Neosartorya fischeri	36.71	3.00e-28	115.00
IUUC-Ncr-068704	Neurospora crassa	45.53	4.00e-109	385.00
IUUC-Nle-069054	Nomascus leucogenys	40.35	7.00e-75	271.00
IUUC-Opr-071109	Ochotona princeps	27.27	7.40e-02	30.40
IUUC-Ont-071624	Oreochromis niloticus	37.13	1.00e-74	271.00
IUUC-Oan-072898	Ornithorhynchus anatinus	40.35	2.00e-81	294.00
IUUC-Ocu-074289	Oryctolagus cuniculus	38.51	4.00e-60	222.00
IUUC-Oba-075985	Oryza barthii	41.19	2.00e-80	290.00
IUUC-Obr-076887	Oryza brachyantha	41.18	1.00e-81	294.00
IUUC-Ogl-077823	Oryza glaberrima	41.19	2.00e-80	290.00
IUUC-Ogu-078412	Oryza glumaepatula	43.07	2.00e-68	251.00
IUUC-Oin-079569	Oryza indica	40.07	6.00e-55	206.00
IUUC-Olo-080249	Oryza longistaminata	40.07	6.00e-54	202.00
IUUC-Ome-081240	Oryza meridionalis	43.07	2.00e-68	250.00
IUUC-Oni-082152	Oryza nivara	43.07	3.00e-68	250.00
IUUC-Opu-084011	Oryza punctata	41.19	2.00e-80	290.00
IUUC-Oru-084719	Oryza rufipogon	43.07	2.00e-68	250.00
IUUC-Osa-085286	Oryza sativa	41.44	1.00e-81	295.00
IUUC-Ola-086525	Oryzias latipes	35.07	5.00e-62	229.00
IUUC-Olu-087876	Ostreococcus lucimarinus	32.43	3.00e-52	196.00
IUUC-Oga-088125	Otolemur garnettii	39.85	7.00e-77	278.00
IUUC-Oar-089701	Ovis aries	40.59	3.00e-78	283.00
IUUC-Ptr-091218	Pan troglodytes	40.84	4.00e-76	276.00
IUUC-Pan-091755	Papio anubis	40.59	5.00e-76	275.00
IUUC-Psi-094061	Pelodiscus sinensis	40.59	2.00e-81	293.00
IUUC-Pma-094430	Petromyzon marinus	39.75	3.00e-50	189.00
IUUC-Pno-094900	Phaeosphaeria nodorum	31.61	5.00e-58	216.00
IUUC-Ppa-095895	Physcomitrella patens	42.64	4.00e-95	339.00
IUUC-Pfo-096297	Poecilia formosa	39.58	2.00e-50	190.00
IUUC-Pab-097717	Pongo abelii	40.59	5.00e-76	275.00
IUUC-Pop-098938	Populus trichocarpa	40.25	4.00e-81	293.00
IUUC-Pca-100389	Procavia capensis	37.60	2.00e-57	214.00
IUUC-Ppe-102045	Prunus persica	41.75	4.00e-83	299.00
IUUC-Pva-102357	Pteropus vampyrus	40.97	7.00e-29	117.00
IUUC-Pgr-103399	Puccinia graminis	45.34	3.00e-102	363.00
IUUC-Ptt-103872	Puccinia triticina	47.30	1.00e-105	374.00
IUUC-Pte-104092	Pyrenophora teres	40.85	2.00e-86	310.00
IUUC-Pyt-104669	Pyrenophora triticirepentis	39.91	3.00e-87	313.00
IUUC-Rno-105515	Rattus norvegicus	40.25	1.00e-77	280.00
IUUC-Sce-106434	Saccharomyces cerevisiae	62.22	3.00e-158	548.00
IUUC-Sha-106808	Sarcophilus harrisii	40.10	1.00e-80	290.00
IUUC-Sja-107995	Schizosaccharomyces japonicus	53.42	5.00e-120	422.00
IUUC-Spo-108044	Schizosaccharomyces pombe	51.50	9.00e-121	424.00
IUUC-Smo-109581	Selaginella moellendorffii	42.29	5.00e-88	315.00
IUUC-Sit-110704	Setaria italica	41.13	2.00e-82	297.00
IUUC-Sly-110990	Solanum lycopersicum	38.96	8.00e-68	248.00
IUUC-Stu-112542	Solanum tuberosum	36.61	2.00e-40	157.00
IUUC-Sar-113766	Sorex araneus	40.25	1.00e-64	237.00
IUUC-Sbi-114016	Sorghum bicolor	41.63	8.00e-82	295.00
IUUC-Sre-115099	Sporisorium reilianum	46.43	3.00e-109	386.00
IUUC-Ssc-115277	Sus scrofa	40.46	1.00e-73	268.00
IUUC-Tgu-117343	Taeniopygia guttata	39.11	2.00e-80	290.00
IUUC-Tru-118397	Takifugu rubripes	37.87	8.00e-77	278.00
IUUC-Tni-120272	Tetraodon nigroviridis	38.18	5.00e-75	272.00
IUUC-Tca-121514	Theobroma cacao	39.56	1.00e-83	301.00
IUUC-Tre-121990	Trichoderma reesei	50.00	3.00e-112	396.00
IUUC-Tvi-122504	Trichoderma virens	52.78	3.00e-108	382.00
IUUC-Tae-123153	Triticum aestivum	41.44	4.00e-81	292.00
IUUC-Tur-126693	Triticum urartu	45.95	7.00e-62	228.00
IUUC-Tme-127011	Tuber melanosporum	47.78	2.00e-124	437.00
IUUC-Tbe-127939	Tupaia belangeri	40.10	5.00e-74	269.00
IUUC-Ttr-128889	Tursiops truncatus	35.15	5.00e-66	242.00
IUUC-Uma-129450	Ustilago maydis	46.62	3.00e-109	386.00
IUUC-Vda-129919	Verticillium dahliae	46.29	7.00e-102	362.00
IUUC-Vvi-130928	Vitis vinifera	39.56	3.00e-82	296.00
IUUC-Xtr-131891	Xenopus tropicalis	34.99	2.00e-70	256.00
IUUC-Xma-133260	Xiphophorus maculatus	40.00	2.00e-50	189.00
IUUC-Yli-134578	Yarrowia lipolytica	55.83	2.00e-148	516.00
IUUC-Zma-135427	Zea mays	41.13	1.00e-81	294.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence