iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111769

Ensembl Protein ID

Solyc01g097290.2.1

UniProt Accession

G9HPW4; G9HPW4_SOLLC

Genbank Protein ID

AEX00359.1

Protein Name

Auxin-responsive protein

Genbank Nucleotide ID

JN379443

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g097290.2	Solyc01g097290.2.1	Solyc01g097290.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	8.70e-16	58.6	135	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsl 69
           +vkvs +g+++++++dl+ + +++ L +a+ + +                         l++s++ ++YeD+dGD++ l++D++++++v+ 
   Q: 135  FVKVSVDGAPYLRKVDLKMYKSYQQLSDALGKmFSsftigncgtqgfkdfmnesklidLLNGSDYVPTYEDKDGDWM-LVGDVPWEMFVD- 223
           8*******************************6225568999***************99999***************.************. PP
   S: 70   laskksllrlliqk 83
                s++rl+i+k
   Q: 224  -----SCKRLRIMK 232
           .....********8 PP

Organism

Solanum lycopersicum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTSVLGAECD KIRLDYEAET ELRLGLPGAN GNELESSNKN NGKRVFSETV DLKLNLSNSK 60
DSTLMDNINI NQVDNMKEKK NNIVVPSSND PAKPPAKAQV VGWPPVRSFR KNVMTVQKNT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACATATTAT TTCATATATA GCATGCTTTC TCATGCTTAT TATACCCTTC TTCTTACACT 60
TTCATATTCA CATTAAAAAT CTTTAAAAAA AAAGAAAGTA TTTTTATCGT AATTCAGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sly:543543

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	61.11	7.00e-51	192.00
IUUC-Atr-002559	Amborella trichopoda	64.14	1.00e-79	288.00
IUUC-Aly-006188	Arabidopsis lyrata	66.27	2.00e-76	278.00
IUUC-Ath-007356	Arabidopsis thaliana	67.59	2.00e-81	294.00
IUUC-Acl-008330	Aspergillus clavatus	29.41	1.30e+00	28.10
IUUC-Bdi-014859	Brachypodium distachyon	59.62	6.00e-71	259.00
IUUC-Bol-016371	Brassica oleracea	69.23	5.00e-82	296.00
IUUC-Bra-016936	Brassica rapa	67.34	3.00e-79	286.00
IUUC-Gma-043010	Glycine max	68.07	9.00e-84	301.00
IUUC-Mtr-058641	Medicago truncatula	68.60	4.00e-88	316.00
IUUC-Mac-064520	Musa acuminata	69.44	2.00e-80	291.00
IUUC-Ont-072310	Oreochromis niloticus	29.55	5.30e-01	28.10
IUUC-Oba-075945	Oryza barthii	72.57	3.00e-68	250.00
IUUC-Obr-076745	Oryza brachyantha	58.04	8.00e-68	249.00
IUUC-Ogl-077429	Oryza glaberrima	53.85	3.00e-64	237.00
IUUC-Ogu-078911	Oryza glumaepatula	56.47	5.00e-73	266.00
IUUC-Oin-079136	Oryza indica	72.57	5.00e-68	249.00
IUUC-Olo-080519	Oryza longistaminata	58.39	3.00e-44	170.00
IUUC-Ome-081785	Oryza meridionalis	49.09	2.00e-47	181.00
IUUC-Oni-082674	Oryza nivara	72.57	4.00e-68	250.00
IUUC-Opu-083338	Oryza punctata	62.58	5.00e-47	179.00
IUUC-Oru-084731	Oryza rufipogon	61.35	3.00e-47	180.00
IUUC-Osa-086164	Oryza sativa	72.57	5.00e-68	249.00
IUUC-Pop-099218	Populus trichocarpa	75.40	3.00e-99	353.00
IUUC-Pca-100345	Procavia capensis	25.00	1.80e-01	29.30
IUUC-Pte-104043	Pyrenophora teres	27.45	6.80e+00	25.80
IUUC-Smo-109586	Selaginella moellendorffii	48.82	6.00e-37	147.00
IUUC-Sit-110063	Setaria italica	59.70	1.00e-75	275.00
IUUC-Stu-112038	Solanum tuberosum	98.01	2.00e-134	470.00
IUUC-Sbi-114725	Sorghum bicolor	75.00	1.00e-70	258.00
IUUC-Tca-121532	Theobroma cacao	73.64	3.00e-100	357.00
IUUC-Tae-122725	Triticum aestivum	76.83	1.00e-67	248.00
IUUC-Tur-126762	Triticum urartu	56.15	2.00e-62	231.00
IUUC-Vpa-130077	Vicugna pacos	31.11	8.10e-01	28.10
IUUC-Vvi-131458	Vitis vinifera	67.06	3.00e-87	313.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence