iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-117198

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01023269

Gene Name

GNB4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000010675.1	ENSTGUT00000011135.1	ENSTGUP00000011019.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-41	137.6	141	176
UBD/Beta-Prp	2.10e-54	184.5	46	268

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvl 35
           gHt+  +c++f +d+ +v++s+D t+ +WD+ tg +
   Q: 141  GHTGYLSCCRFlDDNQIVTSSGDTTCALWDIETGQQ 176
           8**********988*****************99976 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqclee 131
            + r+l gh a+++a+ + +d+ +lv++s+D+ + +wd  t   +h++   ++ v+++++ psg++++ G+ d++  +++l+t++    
   Q: 46   RTRRTLRGHLAKIYAMHWGSDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVR 134
           446899*****************************************************************************987776 PP
   S: 132  ...tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrt 217
               l gh+g  +c ++ + +n +v++s D+t+ lWd++tg+  +t+tg ht++v sls++++++ +vsg++d + klwd++ g c ++
   Q: 135  vsrELPGHTGYLSCCRFLD-DNQIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLSPDMRTFVSGACDASSKLWDIRDGMCRQS 221
           6779*************99.78899***********************9.*************************************** PP
   S: 218  lnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn 264
           ++gh + ++ v f+pn++ +++gs+D + r++dlr ++ l ++++ n
   Q: 222  FTGHVSDINAVCFFPNGHAFATGSDDATCRLFDLRADQELMMYSHDN 268
           **************************************999998854 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MSELEQLRQE AEQLRNQIRD ARKACSDTTL AQITTSLDSV GRIQMRTRRT LRGHLAKIYA 60
MHWGSDSRLL VSASQDGKLI IWDSYTTNKM HAIPLRSSWV MTCAYAPSGN YVACGGLDNI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGGTTTTC TTCACCAGTG GAGTGTGAGA AATAGAGGCT GAAGAAGATG AGTGAGCTGG 60
AGCAGTTACG GCAGGAGGCA GAGCAGCTGC GAAACCAAAT CAGAGTAAGA ATTGTGAATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR001632--Gprotein_B
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00319--GPROTEINB
PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0005765--C:lysosomal membrane
GO:0043209--C:myelin sheath
GO:0007165--P:signal transduction
GO:0021762--P:substantia nigra development

KEGG

tgu:100223077

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001727	Ailuropoda melanoleuca	95.05	3.00e-179	620.00
IUUC-Apl-003923	Anas platyrhynchos	99.69	0.00e+00	629.00
IUUC-Aca-004754	Anolis carolinensis	99.38	0.00e+00	630.00
IUUC-Ago-007831	Ashbya gossypii	37.98	1.00e-64	239.00
IUUC-Acl-008154	Aspergillus clavatus	66.47	8.00e-135	473.00
IUUC-Afl-008568	Aspergillus flavus	66.47	2.00e-136	478.00
IUUC-Afu-008789	Aspergillus fumigatus	66.47	9.00e-135	472.00
IUUC-Ani-009213	Aspergillus nidulans	66.18	9.00e-135	472.00
IUUC-Aor-010165	Aspergillus oryzae	66.47	2.00e-136	478.00
IUUC-Ame-011005	Astyanax mexicanus	93.19	2.00e-176	610.00
IUUC-Bta-013200	Bos taurus	94.74	3.00e-179	620.00
IUUC-Cel-018704	Caenorhabditis elegans	86.76	3.00e-176	610.00
IUUC-Cja-019845	Callithrix jacchus	94.74	6.00e-179	619.00
IUUC-Cfa-020395	Canis familiaris	95.05	3.00e-179	620.00
IUUC-Cpo-021376	Cavia porcellus	94.12	1.00e-178	618.00
IUUC-Csa-023295	Chlorocebus sabaeus	95.05	2.00e-179	620.00
IUUC-Cho-024766	Choloepus hoffmanni	94.46	1.00e-179	621.00
IUUC-Cin-025309	Ciona intestinalis	78.70	4.00e-163	566.00
IUUC-Csv-026258	Ciona savignyi	78.99	7.00e-163	565.00
IUUC-Dno-029001	Dasypus novemcinctus	89.78	7.00e-172	596.00
IUUC-Dor-030322	Dipodomys ordii	80.50	8.00e-154	535.00
IUUC-Dse-031388	Dothistroma septosporum	67.65	7.00e-136	476.00
IUUC-Dme-031748	Drosophila melanogaster	84.41	2.00e-172	597.00
IUUC-Ete-032710	Echinops telfairi	93.51	8.00e-169	585.00
IUUC-Eca-033628	Equus caballus	94.74	5.00e-179	619.00
IUUC-Eeu-034978	Erinaceus europaeus	94.14	1.00e-146	511.00
IUUC-Fca-036537	Felis catus	89.78	9.00e-172	595.00
IUUC-Fal-037616	Ficedula albicollis	100.00	0.00e+00	633.00
IUUC-Gmo-039556	Gadus morhua	95.98	0.00e+00	625.00
IUUC-Ggr-039969	Gaeumannomyces graminis	65.50	1.00e-132	465.00
IUUC-Gga-040249	Gallus gallus	100.00	0.00e+00	633.00
IUUC-Gac-041805	Gasterosteus aculeatus	94.74	3.00e-179	620.00
IUUC-Ggo-044954	Gorilla gorilla	94.74	6.00e-179	619.00
IUUC-Hsa-046105	Homo sapiens	95.05	2.00e-179	620.00
IUUC-Itr-048623	Ictidomys tridecemlineatus	95.03	1.00e-178	617.00
IUUC-Lma-052985	Leptosphaeria maculans	66.37	1.00e-134	472.00
IUUC-Laf-054222	Loxodonta africana	91.76	0.00e+00	627.00
IUUC-Mcc-055787	Macaca mulatta	95.05	2.00e-179	620.00
IUUC-Meu-056902	Macropus eugenii	89.78	6.00e-172	595.00
IUUC-Mor-057188	Magnaporthe oryzae	64.62	5.00e-131	459.00
IUUC-Mpo-057544	Magnaporthe poae	65.20	7.00e-133	466.00
IUUC-Mla-059086	Melampsora laricipopulina	71.22	2.00e-148	517.00
IUUC-Mga-060050	Meleagris gallopavo	99.69	0.00e+00	629.00
IUUC-Mvi-060482	Microbotryum violaceum	70.03	4.00e-146	509.00
IUUC-Mmr-060931	Microcebus murinus	95.05	2.00e-179	620.00
IUUC-Mdo-063055	Monodelphis domestica	97.83	5.00e-180	622.00
IUUC-Mmu-064368	Mus musculus	92.88	3.00e-175	607.00
IUUC-Mpu-066358	Mustela putorius furo	95.05	3.00e-179	620.00
IUUC-Mlu-067328	Myotis lucifugus	94.43	5.00e-178	615.00
IUUC-Nfi-068332	Neosartorya fischeri	66.47	2.00e-134	471.00
IUUC-Nle-069612	Nomascus leucogenys	95.05	2.00e-179	620.00
IUUC-Opr-070866	Ochotona princeps	89.78	9.00e-172	595.00
IUUC-Ont-071287	Oreochromis niloticus	95.05	4.00e-178	616.00
IUUC-Oan-072913	Ornithorhynchus anatinus	99.38	0.00e+00	630.00
IUUC-Ocu-074126	Oryctolagus cuniculus	95.05	4.00e-180	623.00
IUUC-Ola-087297	Oryzias latipes	93.85	8.00e-179	619.00
IUUC-Oga-087961	Otolemur garnettii	91.76	0.00e+00	627.00
IUUC-Oar-089360	Ovis aries	94.74	8.00e-179	619.00
IUUC-Ptr-091437	Pan troglodytes	95.05	2.00e-179	620.00
IUUC-Pan-092195	Papio anubis	94.74	6.00e-179	619.00
IUUC-Psi-093718	Pelodiscus sinensis	100.00	0.00e+00	633.00
IUUC-Pma-094748	Petromyzon marinus	89.29	6.00e-133	465.00
IUUC-Pno-095135	Phaeosphaeria nodorum	66.37	9.00e-135	472.00
IUUC-Pfo-096251	Poecilia formosa	94.43	4.00e-178	616.00
IUUC-Pab-098658	Pongo abelii	91.76	0.00e+00	627.00
IUUC-Pca-100940	Procavia capensis	89.78	9.00e-172	595.00
IUUC-Pgr-103321	Puccinia graminis	71.81	5.00e-150	523.00
IUUC-Ptt-103728	Puccinia triticina	71.81	5.00e-150	523.00
IUUC-Pte-104053	Pyrenophora teres	66.37	4.00e-135	473.00
IUUC-Pyt-104426	Pyrenophora triticirepentis	61.95	1.00e-121	428.00
IUUC-Rno-105112	Rattus norvegicus	91.76	0.00e+00	627.00
IUUC-Sce-106298	Saccharomyces cerevisiae	37.14	4.00e-66	244.00
IUUC-Sha-106534	Sarcophilus harrisii	97.83	3.00e-180	623.00
IUUC-Sar-113642	Sorex araneus	97.06	2.00e-152	531.00
IUUC-Ssc-115595	Sus scrofa	89.78	9.00e-172	595.00
IUUC-Tru-118399	Takifugu rubripes	95.05	3.00e-179	620.00
IUUC-Tsy-119354	Tarsius syrichta	92.57	2.00e-175	607.00
IUUC-Tme-126886	Tuber melanosporum	68.56	1.00e-132	465.00
IUUC-Tbe-128132	Tupaia belangeri	89.06	2.00e-131	460.00
IUUC-Ttr-129243	Tursiops truncatus	95.05	2.00e-179	620.00
IUUC-Vpa-130474	Vicugna pacos	86.76	3.00e-69	254.00
IUUC-Xtr-131924	Xenopus tropicalis	99.07	0.00e+00	629.00
IUUC-Xma-133743	Xiphophorus maculatus	92.94	0.00e+00	643.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence