iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-130943

UUCD1 version

UUC-ViV-00448

Ensembl Protein ID

VIT_06s0061g01190.t01

UniProt Accession

F6GW58; F6GW58_VITVI

Genbank Protein ID

CCB44193.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594957

Gene Name

RAD5; VIT_06s0061g01190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_06s0061g01190	VIT_06s0061g01190.t01	VIT_06s0061g01190.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-06	29.5	821	861

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCle f+d  +++pC H  +++Cl   w    ++    f CP+Cr
   Q: 821  CPICLEAFED-AVLTPCAHRLCRECLlASW----RNPTSGF-CPVCR 861
           **********.888***********99999....4445555.****8 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MGKKVTDELL STVRSVIGLN YSDMDIIRAL HMANNDVTAA INIIFDTPNF GTKMGKNTET 60
FRRNSSSVSA IVVSDSYRNE DETKKCSLGN GTVVSDSNRN NEAKKCSLGS NENDTPTPSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCAAGA AGGTCACGGA TGAACTGTTA TCGACCGTCC GTTCCGTAAT TGGCCTGAAC 60
TACTCCGATA TGGACATCAT CCGTGCGCTT CACATGGCCA ACAACGATGT CACCGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR014001--Helicase_ATP-bd
IPR001650--Helicase_C
IPR014905--HIRAN
IPR027417--P-loop_NTPase
IPR000330--SNF2_N
IPR015940--UBA
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51192--HELICASE_ATP_BIND_1
PS51194--HELICASE_CTER
PS50030--UBA
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00271--Helicase_C
PF08797--HIRAN
PF00176--SNF2_N

SMART

SM00487--DEXDc
SM00490--HELICc
SM00910--HIRAN
SM00184--RING

Gene Ontology

GO:0005524--F:ATP binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0003676--F:nucleic acid binding
GO:0008270--F:zinc ion binding

KEGG

vvi:100246473

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003139	Amborella trichopoda	71.13	0.00e+00	1478.00
IUUC-Aly-006331	Arabidopsis lyrata	71.37	0.00e+00	1486.00
IUUC-Ath-007517	Arabidopsis thaliana	71.56	0.00e+00	1488.00
IUUC-Afu-009055	Aspergillus fumigatus	31.60	3.00e-125	442.00
IUUC-Ani-009340	Aspergillus nidulans	30.20	2.00e-118	420.00
IUUC-Bdi-014646	Brachypodium distachyon	70.47	0.00e+00	1277.00
IUUC-Bol-015484	Brassica oleracea	69.75	0.00e+00	1412.00
IUUC-Bra-016925	Brassica rapa	69.84	0.00e+00	1422.00
IUUC-Dor-030651	Dipodomys ordii	34.39	2.00e-48	187.00
IUUC-Fal-037486	Ficedula albicollis	32.45	5.00e-74	271.00
IUUC-Ggr-039735	Gaeumannomyces graminis	32.32	5.00e-126	444.00
IUUC-Gma-044315	Glycine max	77.65	0.00e+00	1433.00
IUUC-Hvu-047495	Hordeum vulgare	67.21	0.00e+00	1100.00
IUUC-Lpe-051584	Leersia perrieri	61.35	0.00e+00	1220.00
IUUC-Lma-052956	Leptosphaeria maculans	35.06	6.00e-126	444.00
IUUC-Mpo-057407	Magnaporthe poae	31.81	1.00e-130	460.00
IUUC-Mtr-058565	Medicago truncatula	69.35	0.00e+00	1436.00
IUUC-Mvi-060322	Microbotryum violaceum	31.42	4.00e-88	319.00
IUUC-Oba-075937	Oryza barthii	67.80	0.00e+00	1211.00
IUUC-Obr-076403	Oryza brachyantha	71.44	0.00e+00	1264.00
IUUC-Ogl-077573	Oryza glaberrima	71.24	0.00e+00	1312.00
IUUC-Ogu-077957	Oryza glumaepatula	67.65	0.00e+00	1219.00
IUUC-Oin-079146	Oryza indica	71.24	0.00e+00	1312.00
IUUC-Olo-080437	Oryza longistaminata	59.83	0.00e+00	1045.00
IUUC-Ome-081448	Oryza meridionalis	69.27	0.00e+00	1255.00
IUUC-Oni-082389	Oryza nivara	67.07	0.00e+00	1196.00
IUUC-Opu-083322	Oryza punctata	68.01	0.00e+00	1214.00
IUUC-Oru-085066	Oryza rufipogon	67.43	0.00e+00	1219.00
IUUC-Osa-085686	Oryza sativa	73.13	0.00e+00	1192.00
IUUC-Pan-091844	Papio anubis	35.53	4.00e-49	189.00
IUUC-Pno-094916	Phaeosphaeria nodorum	32.05	1.00e-127	449.00
IUUC-Ppa-095877	Physcomitrella patens	56.32	0.00e+00	1037.00
IUUC-Pop-099320	Populus trichocarpa	75.02	0.00e+00	1544.00
IUUC-Ppe-101820	Prunus persica	77.32	0.00e+00	1616.00
IUUC-Pgr-103454	Puccinia graminis	29.66	2.00e-80	294.00
IUUC-Ptt-103829	Puccinia triticina	27.29	6.00e-89	322.00
IUUC-Pyt-104728	Pyrenophora triticirepentis	29.27	3.00e-123	435.00
IUUC-Sit-110076	Setaria italica	70.59	0.00e+00	1274.00
IUUC-Sly-111908	Solanum lycopersicum	72.84	0.00e+00	1531.00
IUUC-Sbi-113927	Sorghum bicolor	64.43	0.00e+00	1290.00
IUUC-Sre-115131	Sporisorium reilianum	33.33	6.00e-114	405.00
IUUC-Tca-121137	Theobroma cacao	76.30	0.00e+00	1596.00
IUUC-Tvi-122597	Trichoderma virens	33.51	5.00e-137	481.00
IUUC-Tae-124722	Triticum aestivum	70.25	0.00e+00	1316.00
IUUC-Tur-126433	Triticum urartu	69.43	0.00e+00	1014.00
IUUC-Tme-126953	Tuber melanosporum	32.77	2.00e-128	452.00
IUUC-Tbe-127642	Tupaia belangeri	38.11	4.00e-45	176.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence