iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-087425

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04066795

Gene Name

RNF38 (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000003296.1	ENSORLT00000004098.1	ENSORLP00000004097.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.70e-08	33.0	431	472

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C++df+    ++vlpC H fh +C+ kw       + + +CP+Cr
   Q: 431  CVVCMSDFESRqlLRVLPCSHEFHGKCVDKW------LRANRTCPICR 472
           ********4434599****************......**********8 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

QMEDSPTPKR QRLSQQSMID LSSAPPSTPS SPIRPWELPP SRRPHPHFIP ERCHTPVRNR 60
RSPPMRRQRG RRDRLTRPAL GHQDENYRHL VPPQGYPPYS QQPPRGPGLD ERPGYHPPNP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGATGGAGG ACAGTCCCAC CCCAAAAAGA CAACGTCTTT CCCAGCAGTC TATGATAGAT 60
CTGAGCTCTG CCCCTCCCTC CACTCCATCT TCTCCTATTC GCCCATGGGA GTTGCCTCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003121	Amborella trichopoda	39.71	5.00e-15	73.20
IUUC-Cre-022984	Chlamydomonas reinhardtii	32.74	1.00e-12	69.70
IUUC-Gmo-039153	Gadus morhua	87.84	8.00e-135	473.00
IUUC-Gac-041884	Gasterosteus aculeatus	79.84	6.00e-153	533.00
IUUC-Loc-052875	Lepisosteus oculatus	65.04	6.00e-119	420.00
IUUC-Mla-058928	Melampsora laricipopulina	40.91	2.00e-10	58.50
IUUC-Ont-072311	Oreochromis niloticus	91.15	1.00e-138	486.00
IUUC-Olo-080723	Oryza longistaminata	24.85	3.00e-15	76.30
IUUC-Pfo-097300	Poecilia formosa	85.63	3.00e-158	551.00
IUUC-Pgr-103421	Puccinia graminis	31.20	1.00e-09	55.50
IUUC-Sly-111904	Solanum lycopersicum	34.03	2.00e-16	80.90
IUUC-Tru-118277	Takifugu rubripes	78.98	4.00e-159	554.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence