iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095180

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545162

Gene Name

PHYPADRAFT_148210

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S273_68V6	PP1S273_68V6.1	PP1S273_68V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/SCF/F-box	9.50e-06	26.5	56	122

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/SCF/F-box

   S: 81   aaapapapa.ptptpeegpdaglldrlpeeilveilkll..dkeellraarvcrrwqelasqkalwkt 145
           +++  p+p    p p + +    ++r++e+ilv+++ +l  d+++l r+a+vcrr++++++ +++w++
   Q: 56   TSSSPPCPVfKQPQPVNPNSLPFFSRISEDILVNVFARLeqDPRDLARLACVCRRFKNVIR-TNCWRH 122
           2233344432368999999999*****************999999************9999.788875 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MRVQSALGSC FSRTHERQLL SQETVERRVS GAHIVSLTEY SRILSWRSVV MAAGATSSSP 60
PCPVFKQPQP VNPNSLPFFS RISEDILVNV FARLEQDPRD LARLACVCRR FKNVIRTNCW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCCCACTT TTGCCCACTT TCGGAGACGA CCCAACTCGA CGCTTCGCCC CCCTTCGCTG 60
CTGCCTGACT GACACTGCTT TTTGCATGCA TCATGCACCG GCAACTGCAC GCCTGCCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom

Pfam

PF12937--F-box-like

KEGG

ppp:PHYPADRAFT_148210

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003146	Amborella trichopoda	68.75	5.00e-54	204.00
IUUC-Aly-006192	Arabidopsis lyrata	42.42	3.00e-75	274.00
IUUC-Ath-007190	Arabidopsis thaliana	64.62	4.00e-48	184.00
IUUC-Bdi-014111	Brachypodium distachyon	62.02	3.00e-43	168.00
IUUC-Bol-015332	Brassica oleracea	39.56	2.00e-71	261.00
IUUC-Bra-017993	Brassica rapa	42.36	2.00e-75	275.00
IUUC-Cin-025334	Ciona intestinalis	27.71	4.80e-01	29.60
IUUC-Ggr-039962	Gaeumannomyces graminis	34.69	2.00e-03	37.40
IUUC-Gma-044377	Glycine max	60.94	2.00e-47	182.00
IUUC-Hvu-047371	Hordeum vulgare	62.02	7.00e-47	180.00
IUUC-Lpe-051202	Leersia perrieri	62.79	3.00e-48	185.00
IUUC-Mpo-057335	Magnaporthe poae	41.30	8.00e-04	38.50
IUUC-Mtr-057994	Medicago truncatula	63.28	1.00e-48	185.00
IUUC-Mac-065238	Musa acuminata	67.97	6.00e-52	197.00
IUUC-Oan-073525	Ornithorhynchus anatinus	31.68	2.40e-02	32.00
IUUC-Obr-076134	Oryza brachyantha	54.88	1.00e-24	103.00
IUUC-Ogu-078015	Oryza glumaepatula	62.02	8.00e-47	179.00
IUUC-Oin-079518	Oryza indica	37.04	9.00e-07	46.20
IUUC-Ome-081208	Oryza meridionalis	62.02	1.00e-46	179.00
IUUC-Oni-082680	Oryza nivara	62.79	3.00e-47	181.00
IUUC-Opu-084169	Oryza punctata	62.79	3.00e-47	181.00
IUUC-Oru-084629	Oryza rufipogon	62.79	4.00e-47	181.00
IUUC-Osa-085886	Oryza sativa	62.79	4.00e-47	181.00
IUUC-Pop-099458	Populus trichocarpa	67.97	2.00e-51	195.00
IUUC-Ppe-101460	Prunus persica	42.23	7.00e-77	279.00
IUUC-Pte-104404	Pyrenophora teres	29.13	2.60e-02	33.50
IUUC-Pyt-104651	Pyrenophora triticirepentis	30.77	1.10e-01	32.00
IUUC-Smo-108886	Selaginella moellendorffii	69.84	7.00e-50	189.00
IUUC-Sit-110679	Setaria italica	63.57	5.00e-48	184.00
IUUC-Sly-111323	Solanum lycopersicum	41.76	8.00e-69	253.00
IUUC-Stu-112407	Solanum tuberosum	69.29	5.00e-53	200.00
IUUC-Sbi-113782	Sorghum bicolor	62.79	4.00e-48	184.00
IUUC-Tgu-117212	Taeniopygia guttata	33.93	2.00e-01	30.80
IUUC-Tca-121453	Theobroma cacao	69.84	7.00e-52	196.00
IUUC-Tae-123170	Triticum aestivum	61.72	4.00e-47	181.00
IUUC-Vvi-131404	Vitis vinifera	37.16	4.00e-68	251.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence