iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017262

Ensembl Protein ID

Bra012634.1-P

UniProt Accession

M4D824; M4D824_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra012634	Bra012634.1	Bra012634.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	8.40e-80	269.5	509	812

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrellle.kkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEf 95
           +Gl NlgN+C++NSvLQcL+++ +l e l + + +e +n     ++  ++ ++++  +e+ +++++++++p ++l+ l+ ++  f+ y+q+Da+Ef
   Q: 509  VGLWNLGNSCFVNSVLQCLTHTLPLIESLCSyEPPEPCNCG---NEWFCVRSAFKGHLEAALTTSRSSIAPYSFLNNLNYFSADFRRYQQEDAHEF 601
           69*****************************8888888875...5799************************************************ PP
   S: 96   laflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslqdcL 191
           l+ +ld+le+ +                  l+d ++++  ++  +l++++F+g+l sq++c +c++vs+++e+ l lsl++++ +     +lq++L
   Q: 602  LQAFLDKLERCC------------------LEDPSSDSLSSQDVNLVQRIFGGRLVSQLRCCDCNSVSETFENSLGLSLEIEDVD-----NLQSAL 674
           ************..................556677899999*******************************************.....9***** PP
   S: 192  esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHs 287
           +sft+ e+l+  + + c++ck+k+  ek+l l klP+v ++hLkRf  ++++ + eki+++v+fple+dl+p+++++++++ ++ kY+L+a v H 
   Q: 675  DSFTRVEKLD--EPMTCDNCKEKVSKEKQLLLYKLPQVVTFHLKRF--KNNGFFMEKIFNHVKFPLEIDLQPYMVRSQNNE-VTAKYRLYAFVEHF 765
           *********8..59********************************..88999**********************977665.7************* PP
   S: 288  GslssGHYvayvknekgkWllfdDskVtevkeeevleetgstaYvlfYkr 337
           Gsl  GHY +yv++  + W +fdD++Vt ++e++vl+   ++aY+lfY r
   Q: 766  GSLAYGHYSSYVRSAPKIWHQFDDKQVTRIDEDRVLS---QDAYILFYAR 812
           **************9999*******************...********87 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSSSDNLTDK TAVFRKLKSK SDNKVCFDCS AKNPTWASVT YGIFLCIDCS ATHRSLGVHI 60
SFVRSTNLDS WSPEQLRTMM FGGNNRAQVF FKQHGWTDGG KIEAKYTSRA ADLYRQLLAK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCTTCTT CCGACAACCT CACCGACAAA ACAGCTGTCT TCAGAAAACT CAAATCAAAA 60
TCTGACAACA AGGTTTCGGT TTTGTTTATT TGTTATTGTA ATGTGTAGAT CTGGGACTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc

Interpro

IPR001164--ArfGAP
IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50115--ARFGAP
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF01412--ArfGap
PF00443--UCH

PRINTS

PR00405--REVINTRACTNG

SMART

SM00105--ArfGap

Gene Ontology

GO:0005096--F:GTPase activator activity
GO:0046872--F:metal ion binding
GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002708	Amborella trichopoda	46.63	7.00e-83	301.00
IUUC-Aly-006314	Arabidopsis lyrata	67.24	0.00e+00	1281.00
IUUC-Ath-006916	Arabidopsis thaliana	59.25	6.00e-174	603.00
IUUC-Bdi-014605	Brachypodium distachyon	46.26	1.00e-61	229.00
IUUC-Bol-015783	Brassica oleracea	90.79	0.00e+00	1078.00
IUUC-Gma-044214	Glycine max	49.48	1.00e-105	377.00
IUUC-Lpe-051429	Leersia perrieri	40.91	7.00e-59	221.00
IUUC-Mtr-058503	Medicago truncatula	51.59	1.00e-95	343.00
IUUC-Ogl-077443	Oryza glaberrima	40.44	2.00e-59	223.00
IUUC-Ogu-078191	Oryza glumaepatula	41.95	2.00e-68	253.00
IUUC-Oin-079634	Oryza indica	41.95	2.00e-68	253.00
IUUC-Oni-082505	Oryza nivara	43.10	5.00e-71	262.00
IUUC-Oru-085176	Oryza rufipogon	41.07	3.00e-57	216.00
IUUC-Pop-098814	Populus trichocarpa	50.69	2.00e-97	350.00
IUUC-Ppe-101932	Prunus persica	53.05	3.00e-101	362.00
IUUC-Sly-111383	Solanum lycopersicum	50.56	2.00e-101	363.00
IUUC-Stu-112476	Solanum tuberosum	50.58	1.00e-100	360.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence