iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114509

UUCD1 version

UUC-SoB-01057

Ensembl Protein ID

Sb06g026220.1

UniProt Accession

A0A1B6PMS4; A0A1B6PMS4_SORBI

Genbank Protein ID

KXG26971.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G188700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g026220	Sb06g026220.1	Sb06g026220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.50e-09	36.6	92	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl+ +  +d+++ l+ C Hvfh+ Cl +w     ++  + +CPlCr
   Q: 92   CAVCLSGIggRDEVRRLSnCRHVFHRACLDRW-----MEHDQRTCPLCR 135
           ******9999555887666*************.....799********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGFPVGYSEL VLPKQLLHLL LLLGYIRRFL LWAFDAVGLG DLLDLGDDHH QALLQQQHRR 60
PEFRAVPAMV IEEVLPVVRF DELEEARVGG DCAVCLSGIG GRDEVRRLSN CRHVFHRACL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTTTCC CGGTGGGTTA CTCGGAGCTG GTGCTCCCGA AGCAGCTGCT CCACCTCCTC 60
CTGCTCCTGG GGTACATCCG CCGCTTCCTC CTCTGGGCGT TCGACGCCGT GGGGCTCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002812	Amborella trichopoda	46.15	3.00e-30	123.00
IUUC-Aly-006447	Arabidopsis lyrata	42.95	1.00e-30	125.00
IUUC-Ath-006985	Arabidopsis thaliana	42.95	1.00e-30	125.00
IUUC-Bdi-014279	Brachypodium distachyon	73.15	5.00e-48	182.00
IUUC-Bol-015207	Brassica oleracea	40.83	1.00e-31	127.00
IUUC-Bra-017849	Brassica rapa	41.76	4.00e-31	126.00
IUUC-Gma-042994	Glycine max	44.58	3.00e-31	126.00
IUUC-Hvu-047847	Hordeum vulgare	71.72	3.00e-43	167.00
IUUC-Lpe-050715	Leersia perrieri	85.61	9.00e-57	211.00
IUUC-Mtr-057802	Medicago truncatula	48.95	4.00e-32	129.00
IUUC-Mac-064617	Musa acuminata	60.51	1.00e-39	155.00
IUUC-Oba-075031	Oryza barthii	66.19	4.00e-39	152.00
IUUC-Obr-076564	Oryza brachyantha	84.25	1.00e-51	193.00
IUUC-Ogl-077699	Oryza glaberrima	75.00	3.00e-48	183.00
IUUC-Ogu-078689	Oryza glumaepatula	75.00	3.00e-48	183.00
IUUC-Oin-079149	Oryza indica	75.00	4.00e-48	183.00
IUUC-Ome-081370	Oryza meridionalis	75.46	1.00e-48	185.00
IUUC-Oni-082967	Oryza nivara	75.00	4.00e-48	183.00
IUUC-Opu-083259	Oryza punctata	75.84	7.00e-51	192.00
IUUC-Oru-084405	Oryza rufipogon	75.46	1.00e-48	185.00
IUUC-Osa-085893	Oryza sativa	75.46	8.00e-49	185.00
IUUC-Pop-098894	Populus trichocarpa	44.68	4.00e-31	126.00
IUUC-Ppe-102039	Prunus persica	48.25	2.00e-29	120.00
IUUC-Sly-111431	Solanum lycopersicum	48.17	2.00e-30	123.00
IUUC-Stu-112490	Solanum tuberosum	46.34	1.00e-30	124.00
IUUC-Tca-121864	Theobroma cacao	43.93	1.00e-30	124.00
IUUC-Tae-122742	Triticum aestivum	78.26	2.00e-55	207.00
IUUC-Vvi-131445	Vitis vinifera	53.42	3.00e-31	126.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence