iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oin-079272

Ensembl Protein ID

BGIOSGA014317-PA

UniProt Accession

A2XXR7; ATG8B_ORYSI

Genbank Protein ID

EAY95627.1

Protein Name

Autophagy-related protein 8B; Autophagy-related ubiquitin-like modifier ATG8B

Genbank Nucleotide ID

CM000129

Gene Name

ATG8B; APG8B; OsI_016860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BGIOSGA014317	BGIOSGA014317-TA	BGIOSGA014317-PA

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UBL/ATG8	3.10e-48	163.2	15	117

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UBL/ATG8

   S: 2    rkeevekirdkfpdkiPvivekakkekipeldkkkylvPsdltvgqlvkiirkrlqlraedalfllvnnslvsvsatlaeiyeeekdedgfly 94
           r++e+++ir+k+ d+iPviveka++++ip++dkkkylvP+dltvgq+v+++rkr++l +e+a+f++v n+l++++a +++iyee+kdedgfly
   Q: 15   RQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLY 107
           899****************************************************************************************** PP
   S: 95   vayaseetfG 104
           ++y++e+tfG
   Q: 108  MTYSGENTFG 117
           *********9 PP

Organism

Oryza indica

Functional Description
(View)

Ubiquitin-like modifier involved in autophagosomes formation. May mediate the delivery of the autophagosomes to the vacuole via the microtubule cytoskeleton.

Protein Sequence
(Fasta)

MAKSSFKLDH TLERRQAEAN RIREKYSDRI PVIVEKAERS DIPDIDKKKY LVPADLTVGQ 60
FVYVVRKRIK LSPEKAIFIF VKNTLPPTAA LMSAIYEENK DEDGFLYMTY SGENTFGLL 119

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAAGA GCTCGTTCAA GCTGGACCAC ACGCTCGGTC GGTTTGTTTT CTTATCGTGT 60
TCCTCTTTTT ATTTTTTCCT ATATGTGCTT TAGTAGTGTG GCTGCGATGA TTGCGTGTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0072--Autophagy
KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0968--Cytoplasmic vesicle
KW-0206--Cytoskeleton
KW-0449--Lipoprotein
KW-0472--Membrane
KW-0493--Microtubule
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0833--Ubl conjugation pathway
KW-0926--Vacuole

Interpro

IPR004241--Atg8-like
IPR029071--Ubiquitin-rel_dom

Pfam

PF02991--Atg8

Gene Ontology

GO:0000421--C:autophagosome membrane
GO:0031410--C:cytoplasmic vesicle
GO:0005874--C:microtubule
GO:0006914--P:autophagy
GO:0015031--P:protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018200	Caenorhabditis elegans	53.91	7.00e-35	138.00
IUUC-Cre-022866	Chlamydomonas reinhardtii	84.96	1.00e-48	184.00
IUUC-Cin-025297	Ciona intestinalis	54.78	1.00e-36	144.00
IUUC-Itr-048838	Ictidomys tridecemlineatus	57.39	4.00e-38	149.00
IUUC-Lpe-051450	Leersia perrieri	97.48	2.00e-64	236.00
IUUC-Laf-054083	Loxodonta africana	56.41	3.00e-38	149.00
IUUC-Mga-060108	Meleagris gallopavo	57.39	4.00e-38	149.00
IUUC-Oba-075722	Oryza barthii	99.16	8.00e-66	240.00
IUUC-Obr-076830	Oryza brachyantha	98.31	1.00e-64	236.00
IUUC-Ogl-077551	Oryza glaberrima	99.16	8.00e-66	240.00
IUUC-Ogu-078499	Oryza glumaepatula	99.16	8.00e-66	240.00
IUUC-Ome-081990	Oryza meridionalis	100.00	2.00e-66	243.00
IUUC-Oni-082665	Oryza nivara	100.00	2.00e-66	243.00
IUUC-Opu-083501	Oryza punctata	97.48	8.00e-65	237.00
IUUC-Oru-084425	Oryza rufipogon	100.00	2.00e-66	243.00
IUUC-Osa-085618	Oryza sativa	100.00	2.00e-66	243.00
IUUC-Oar-089396	Ovis aries	56.41	8.00e-38	148.00
IUUC-Pop-099961	Populus trichocarpa	91.53	3.00e-61	225.00
IUUC-Sja-107857	Schizosaccharomyces japonicus	76.52	2.00e-49	186.00
IUUC-Spo-108156	Schizosaccharomyces pombe	75.65	6.00e-42	161.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence