iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ggr-040116

Ensembl Protein ID

GGTG_01909T0

UniProt Accession

J3NKW8; J3NKW8_GAGT3

Genbank Protein ID

EJT81935.1

Protein Name

UV excision repair protein Rad23

Genbank Nucleotide ID

ADBI01000189

Gene Name

GGTG_01909

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GGTG_01909	GGTG_01909T0	GGTG_01909T0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	6.40e-17	60.6	330	367
ULD/UDP/UBQ/UBQ_Other	3.20e-06	26.5	1	46

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraannnleaAveyLld 40
           + d++e l+  GFdr++a+qa  a+++n e A+++L+d
   Q: 330  ERDAIERLCRLGFDRDQAIQAYFACDKNEELAANFLFD 367
           5699*********************************8 PP

ULD/UDP/UBQ/UBQ_Other

   S: 1    vqvtvksldgseltlkvnpsdtVaeLKekiekklgippeqqrLiyk 46
           ++vt+k+l+   + ++v+p+d V+ +K+ki+++ g  p  q+Liy+
   Q: 1    MKVTFKDLKQQKFVIEVEPTDLVSAVKQKISEERGWDPKLQKLIYS 46
           79******************************************97 PP

Organism

Gaeumannomyces graminis

Protein Sequence
(Fasta)

MKVTFKDLKQ QKFVIEVEPT DLVSAVKQKI SEERGWDPKL QKLIYSAQAN PGRRSPRRRV 60
LQVGGTTGDA RGPGSGRHPR GSRSGPRPSG PAVPATPTPP QREQPGQYND PNMLSTGAAR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGGTCA CTTTCAAGGT ATGCTGTGCA TTGCCCGCCT GGTGCTTGGT GGCGGGTCCC 60
TCTCCCGGCT GGGCCCCGAC AATGCCGCCG TTGCGACGAC ACCACCGCCC GACCGCAGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR004806--Rad23
IPR006636--STI1_HS-bd
IPR015940--UBA
IPR009060--UBA-like
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR015360--XPC-bd

PROSITE

PS50030--UBA
PS50053--UBIQUITIN_2

Pfam

PF00627--UBA
PF00240--ubiquitin
PF09280--XPC-binding

PRINTS

PR01839--RAD23PROTEIN

SMART

SM00727--STI1
SM00165--UBA

Gene Ontology

GO:0005829--C:cytosol
GO:0005635--C:nuclear envelope
GO:0003684--F:damaged DNA binding
GO:0042177--P:negative regulation of protein catabolic process
GO:0006289--P:nucleotide-excision repair
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0016567--P:protein ubiquitination

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000770	Aegilops tauschii	48.09	6.00e-21	94.00
IUUC-Aml-001195	Ailuropoda melanoleuca	40.18	5.00e-15	73.90
IUUC-Atr-002756	Amborella trichopoda	50.00	6.00e-23	100.00
IUUC-Apl-003371	Anas platyrhynchos	42.98	2.00e-16	78.60
IUUC-Aca-004704	Anolis carolinensis	60.00	4.00e-13	67.40
IUUC-Aly-005486	Arabidopsis lyrata	50.40	2.00e-22	98.20
IUUC-Ath-006688	Arabidopsis thaliana	51.20	4.00e-22	97.40
IUUC-Ago-007830	Ashbya gossypii	28.29	4.00e-14	70.90
IUUC-Acl-008212	Aspergillus clavatus	78.81	7.00e-39	152.00
IUUC-Afl-008605	Aspergillus flavus	75.83	3.00e-37	147.00
IUUC-Afu-008877	Aspergillus fumigatus	59.09	1.00e-55	208.00
IUUC-Ani-009460	Aspergillus nidulans	74.58	2.00e-35	141.00
IUUC-Aor-010032	Aspergillus oryzae	75.83	2.00e-37	147.00
IUUC-Ate-010458	Aspergillus terreus	55.51	1.00e-55	208.00
IUUC-Ame-011704	Astyanax mexicanus	45.80	7.00e-18	82.00
IUUC-Bgr-012056	Blumeria graminis	81.15	1.00e-37	149.00
IUUC-Bta-012922	Bos taurus	41.07	3.00e-15	74.30
IUUC-Bci-013933	Botrytis cinerea	85.83	2.00e-47	181.00
IUUC-Bdi-014355	Brachypodium distachyon	49.62	2.00e-23	101.00
IUUC-Bol-016300	Brassica oleracea	50.00	5.00e-23	100.00
IUUC-Bra-016952	Brassica rapa	50.00	1.00e-22	99.40
IUUC-Cel-018364	Caenorhabditis elegans	29.07	2.00e-13	68.20
IUUC-Cja-018772	Callithrix jacchus	40.18	5.00e-15	73.90
IUUC-Cfa-020683	Canis familiaris	40.18	5.00e-15	73.90
IUUC-Cpo-022145	Cavia porcellus	45.71	4.00e-16	77.40
IUUC-Cre-022810	Chlamydomonas reinhardtii	41.58	1.00e-13	68.90
IUUC-Csa-023714	Chlorocebus sabaeus	40.18	5.00e-15	73.90
IUUC-Cho-024814	Choloepus hoffmanni	44.36	3.00e-15	74.30
IUUC-Cin-025741	Ciona intestinalis	39.80	2.00e-14	71.60
IUUC-Csv-025823	Ciona savignyi	52.17	1.00e-09	55.10
IUUC-Cgl-026495	Colletotrichum gloeosporioides	91.11	1.00e-42	165.00
IUUC-Cne-027056	Cryptococcus neoformans	46.53	1.00e-13	69.30
IUUC-Cme-027260	Cyanidioschyzon merolae	51.16	6.00e-08	50.40
IUUC-Dre-027581	Danio rerio	52.10	7.00e-18	83.20
IUUC-Dno-029543	Dasypus novemcinctus	40.18	5.00e-15	73.90
IUUC-Dor-030358	Dipodomys ordii	47.96	1.00e-15	75.50
IUUC-Dse-031336	Dothistroma septosporum	66.18	8.00e-65	239.00
IUUC-Dme-032027	Drosophila melanogaster	31.03	2.00e-12	65.10
IUUC-Ete-032583	Echinops telfairi	40.18	6.00e-15	73.60
IUUC-Eca-034243	Equus caballus	40.18	6.00e-15	73.60
IUUC-Eeu-034721	Erinaceus europaeus	53.19	5.00e-10	57.00
IUUC-Fca-035679	Felis catus	40.18	6.00e-15	73.60
IUUC-Fal-037148	Ficedula albicollis	42.11	6.00e-16	76.60
IUUC-Fox-037960	Fusarium oxysporum	69.03	2.00e-71	261.00
IUUC-Fso-038107	Fusarium solani	94.17	7.00e-53	199.00
IUUC-Gmo-039080	Gadus morhua	46.83	3.00e-16	77.40
IUUC-Gga-040544	Gallus gallus	42.98	2.00e-16	78.60
IUUC-Gac-042239	Gasterosteus aculeatus	41.43	2.00e-13	68.20
IUUC-Gma-043937	Glycine max	50.39	2.00e-21	94.70
IUUC-Ggo-045125	Gorilla gorilla	40.18	4.00e-15	73.90
IUUC-Hsa-046519	Homo sapiens	40.18	4.00e-15	73.90
IUUC-Hvu-047832	Hordeum vulgare	48.09	3.00e-21	94.70
IUUC-Itr-048295	Ictidomys tridecemlineatus	40.54	5.00e-15	73.90
IUUC-Kpa-049314	Komagataella pastoris	50.53	2.00e-21	94.70
IUUC-Lch-049719	Latimeria chalumnae	50.41	8.00e-20	89.70
IUUC-Lpe-050929	Leersia perrieri	47.29	9.00e-22	96.30
IUUC-Loc-051748	Lepisosteus oculatus	48.08	7.00e-17	79.70
IUUC-Lma-053328	Leptosphaeria maculans	56.25	1.00e-11	59.30
IUUC-Laf-054293	Loxodonta africana	40.18	5.00e-15	73.60
IUUC-Mcc-055600	Macaca mulatta	41.07	4.00e-15	73.90
IUUC-Meu-056082	Macropus eugenii	40.91	5.00e-15	73.90
IUUC-Mor-057287	Magnaporthe oryzae	91.96	2.00e-46	177.00
IUUC-Mpo-057609	Magnaporthe poae	96.67	1.00e-54	204.00
IUUC-Mtr-058713	Medicago truncatula	47.15	5.00e-20	90.10
IUUC-Mla-058961	Melampsora laricipopulina	48.12	7.00e-21	93.20
IUUC-Mvi-060220	Microbotryum violaceum	40.35	2.00e-15	75.50
IUUC-Mmr-061771	Microcebus murinus	53.19	2.00e-10	58.20
IUUC-Mdo-062742	Monodelphis domestica	52.27	2.00e-19	88.60
IUUC-Mmu-063258	Mus musculus	41.78	1.00e-14	72.80
IUUC-Mac-064724	Musa acuminata	48.82	2.00e-22	98.20
IUUC-Mpu-066389	Mustela putorius furo	40.18	3.00e-15	74.30
IUUC-Mlu-067999	Myotis lucifugus	39.47	1.00e-14	72.80
IUUC-Nfi-068390	Neosartorya fischeri	59.09	2.00e-55	207.00
IUUC-Ncr-068685	Neurospora crassa	61.99	8.00e-55	206.00
IUUC-Nle-069655	Nomascus leucogenys	40.18	5.00e-15	73.90
IUUC-Ont-072484	Oreochromis niloticus	45.74	1.00e-15	75.90
IUUC-Oan-073258	Ornithorhynchus anatinus	40.54	4.00e-15	72.40
IUUC-Ocu-074831	Oryctolagus cuniculus	41.07	4.00e-15	74.30
IUUC-Oba-075872	Oryza barthii	47.37	1.00e-21	95.90
IUUC-Obr-076909	Oryza brachyantha	44.70	4.00e-20	90.50
IUUC-Ogl-077021	Oryza glaberrima	47.37	1.00e-21	95.90
IUUC-Ogu-078101	Oryza glumaepatula	47.37	9.00e-22	96.30
IUUC-Oin-079727	Oryza indica	47.37	1.00e-21	95.90
IUUC-Olo-080382	Oryza longistaminata	47.37	1.00e-21	95.90
IUUC-Ome-081652	Oryza meridionalis	47.20	1.00e-21	95.50
IUUC-Oni-082847	Oryza nivara	47.37	1.00e-21	95.90
IUUC-Opu-083789	Oryza punctata	47.37	6.00e-22	96.70
IUUC-Oru-084816	Oryza rufipogon	51.15	4.00e-21	94.00
IUUC-Osa-086112	Oryza sativa	51.15	4.00e-21	94.00
IUUC-Ola-086540	Oryzias latipes	39.32	2.00e-13	68.60
IUUC-Olu-087843	Ostreococcus lucimarinus	44.44	1.00e-16	79.00
IUUC-Oga-088023	Otolemur garnettii	39.13	1.00e-14	72.80
IUUC-Oar-089964	Ovis aries	40.18	5.00e-15	73.90
IUUC-Ptr-091165	Pan troglodytes	40.18	4.00e-15	73.90
IUUC-Pan-092140	Papio anubis	47.96	2.00e-15	75.50
IUUC-Psi-093477	Pelodiscus sinensis	41.58	1.00e-12	65.50
IUUC-Pno-095064	Phaeosphaeria nodorum	86.67	4.00e-31	127.00
IUUC-Ppa-095654	Physcomitrella patens	49.61	2.00e-20	91.30
IUUC-Pfo-097385	Poecilia formosa	45.26	1.00e-16	79.30
IUUC-Pab-097868	Pongo abelii	40.18	4.00e-15	73.90
IUUC-Pop-099774	Populus trichocarpa	50.81	7.00e-22	95.50
IUUC-Pca-100348	Procavia capensis	47.96	9.00e-16	76.30
IUUC-Ppe-101830	Prunus persica	51.18	4.00e-23	100.00
IUUC-Pva-102137	Pteropus vampyrus	40.18	4.00e-15	74.30
IUUC-Pgr-103618	Puccinia graminis	46.53	1.00e-16	79.30
IUUC-Ptt-103717	Puccinia triticina	52.27	1.00e-24	105.00
IUUC-Pte-104303	Pyrenophora teres	88.14	8.00e-48	182.00
IUUC-Pyt-104580	Pyrenophora triticirepentis	88.14	9.00e-48	182.00
IUUC-Rno-105569	Rattus norvegicus	47.96	1.00e-15	75.90
IUUC-Sce-106214	Saccharomyces cerevisiae	39.84	3.00e-15	74.70
IUUC-Sha-107073	Sarcophilus harrisii	40.54	6.00e-15	73.60
IUUC-Sja-107851	Schizosaccharomyces japonicus	63.04	4.00e-29	120.00
IUUC-Spo-108298	Schizosaccharomyces pombe	58.00	2.00e-29	121.00
IUUC-Ssl-108382	Sclerotinia sclerotiorum	83.51	2.00e-44	171.00
IUUC-Smo-109129	Selaginella moellendorffii	55.81	1.00e-19	89.40
IUUC-Sit-109813	Setaria italica	46.56	2.00e-20	92.00
IUUC-Sly-111480	Solanum lycopersicum	55.37	4.00e-24	103.00
IUUC-Stu-112054	Solanum tuberosum	54.55	1.00e-23	102.00
IUUC-Sar-112925	Sorex araneus	40.18	6.00e-15	73.60
IUUC-Sbi-113871	Sorghum bicolor	49.59	2.00e-21	95.50
IUUC-Sre-114894	Sporisorium reilianum	52.54	4.00e-12	64.30
IUUC-Ssc-116329	Sus scrofa	40.18	5.00e-15	73.90
IUUC-Tgu-116918	Taeniopygia guttata	42.11	7.00e-16	76.60
IUUC-Tru-117920	Takifugu rubripes	46.40	2.00e-17	82.00
IUUC-Tsy-118836	Tarsius syrichta	40.18	6.00e-15	73.60
IUUC-Tni-120493	Tetraodon nigroviridis	45.60	4.00e-17	80.50
IUUC-Tca-121617	Theobroma cacao	49.21	2.00e-21	95.90
IUUC-Tre-121911	Trichoderma reesei	69.58	3.00e-71	260.00
IUUC-Tvi-122617	Trichoderma virens	67.30	2.00e-70	257.00
IUUC-Tae-125620	Triticum aestivum	49.62	5.00e-22	96.70
IUUC-Tur-126610	Triticum urartu	48.09	3.00e-21	95.10
IUUC-Tme-127092	Tuber melanosporum	79.84	8.00e-42	162.00
IUUC-Tbe-127603	Tupaia belangeri	47.22	2.00e-17	81.60
IUUC-Ttr-128464	Tursiops truncatus	40.18	6.00e-15	73.60
IUUC-Uma-129484	Ustilago maydis	59.62	1.00e-12	65.90
IUUC-Vda-129946	Verticillium dahliae	93.65	6.00e-55	206.00
IUUC-Vpa-130357	Vicugna pacos	55.32	5.00e-11	60.10
IUUC-Vvi-131039	Vitis vinifera	46.92	4.00e-21	94.00
IUUC-Xtr-132679	Xenopus tropicalis	62.00	1.00e-11	62.80
IUUC-Xma-133503	Xiphophorus maculatus	43.36	9.00e-17	79.30
IUUC-Yli-134615	Yarrowia lipolytica	58.68	3.00e-22	97.80
IUUC-Zma-135678	Zea mays	47.15	2.00e-20	92.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence