iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058355

Ensembl Protein ID

KEH38923

UniProt Accession

A0A072VBZ5; A0A072VBZ5_MEDTR

Genbank Protein ID

KEH38923.1

Protein Name

DNA-binding and zinc-finger protein

Genbank Nucleotide ID

CM001218

Gene Name

MTR_2g084615

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_2g084615	KEH38923	KEH38923

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	2.00e-12	48.5	1139	1188

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCrs 53
           vC++C++ ++++ + + Ce C++w+H++ l+l+ e++  +   + C +Cr+
   Q: 1139 VCHLCHKRYRSDLMYIGCETCTRWYHAEALELE-ESKIFSVLGFKCCRCRK 1188
           8*********999********************.888877777******85 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAPPSGDFAS EPPKRRGRPR KPRRKGKETV TVELKKPIVL IGRCVLKEFS ETVQIGKVMS 60
YEIGFYRVEY ENGVFEDLDS SAIRRILIED CDFDDDLIRR KNELEQSLLN KIIEESRELN 120

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Nucleotide Sequence
(Fasta)

CACAATTCTT CAAACCCTAA CAATTTACAC TGAACTTCCG CAAACAAAAG CCGTAACAAT 60
TTACACCACC ACCGATGGCG CCACCATCGG GGGATTTTGC GTCGGAACCA CCAAAACGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018501--DDT_dom
IPR028942--WHIM1_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50827--DDT
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF02791--DDT
PF00628--PHD
PF15612--WHIM1

SMART

SM00571--DDT
SM00249--PHD

Gene Ontology

GO:0003677--F:DNA binding
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_2g084615

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014067	Brachypodium distachyon	42.77	9.00e-88	318.00
IUUC-Opu-083405	Oryza punctata	41.70	8.00e-96	345.00
IUUC-Pop-099219	Populus trichocarpa	42.11	0.00e+00	717.00
IUUC-Smo-108764	Selaginella moellendorffii	29.87	6.00e-122	432.00
IUUC-Sly-111813	Solanum lycopersicum	44.72	0.00e+00	979.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence