iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107333

Ensembl Protein ID

ENSSHAP00000004678.1

UniProt Accession

G3VNC3; G3VNC3_SARHA

Genbank Protein ID

ENSSHAP00000004678

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01183892

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000004107.1	ENSSHAT00000004726.1	ENSSHAP00000004678.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	9.70e-18	64.3	399	443

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C vC++gge    l++C+ C + +H +Cl+++  +e pn e w Cp C+
   Q: 399  EFCRVCKDGGE----LLCCDPCPSSYHIHCLNPP-LPEIPNGE-WLCPHCT 443
           58*********....*******************.*******8.******5 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

EVETPKLKKK KKPKKPRDPK IPKSKRQKKE LGDSSGEGPE FVEEEDEMVL RSDSEGSDYT 60
PGKKKKKKLG PKKEKKSKSK RKEEEEEDDD DDDSKEPKSS GQLLEDWGME DIDHVFSEED 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGTAGAGA CTCCTAAACT CAAAAAGAAG AAGAAGCCTA AGAAACCTCG GGACCCTAAA 60
ATCCCAAAGA GCAAACGACA AAAAAAGGAG CTGGGAGACA GTTCTGGGGA GGGGCCTGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR028725--CHD4
IPR012958--CHD_N
IPR009071--HMG_box_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF08073--CHDNT
PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0016581--C:NuRD complex
GO:0005524--F:ATP binding
GO:0003677--F:DNA binding
GO:0016818--F:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0008270--F:zinc ion binding
GO:0006325--P:chromatin organization
GO:0006355--P:regulation of transcription, DNA-templated
GO:0051225--P:spindle assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050827	Leersia perrieri	28.47	6.00e-13	69.70
IUUC-Mtr-058688	Medicago truncatula	32.87	2.00e-13	71.60
IUUC-Mac-065186	Musa acuminata	34.07	4.00e-14	73.60
IUUC-Oin-079045	Oryza indica	28.67	7.00e-08	52.80
IUUC-Pop-099262	Populus trichocarpa	29.05	7.00e-14	72.80
IUUC-Sly-110905	Solanum lycopersicum	31.76	3.00e-15	77.40
IUUC-Stu-112265	Solanum tuberosum	31.76	4.00e-15	76.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence