iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058299

Ensembl Protein ID

AES72269

UniProt Accession

G7J4E6; G7J4E6_MEDTR

Genbank Protein ID

AES72269.1

Protein Name

Zinc finger, C3HC4 type (RING finger) protein

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g087900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g087900	AES72269	AES72269

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	5.90e-10	40.9	69	111

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl++f++g  ++ l C+H+fh+dCl kw     ++  +++CPlCr
   Q: 69   CSVCLSEFEEGekVRRLKCKHTFHKDCLDKW-----LQDYFATCPLCR 111
           ********66555999***************.....788999*****8 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MTVDISNVFQ KLCNKIAILL IFVLVELIIF IWKLTSDTQS ITTRQYIKFI EEKNPTIRYN 60
KKLNSHGDCS VCLSEFEEGE KVRRLKCKHT FHKDCLDKWL QDYFATCPLC REQVLPDNVV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTTCTGTT AGATTATAAT TTATATATCT ATCATATCAT ATAATATATA AAGATTGAAT 60
TTGAGATCTC TCATATCATA TTAGGCATAG CAACCATGAC AGTTGATATC TCCAACGTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

mtr:MTR_3g087900

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cel-018118	Caenorhabditis elegans	47.62	2.00e-13	69.70
IUUC-Cne-027033	Cryptococcus neoformans	40.28	2.00e-11	63.50
IUUC-Gma-042793	Glycine max	61.29	6.00e-41	159.00
IUUC-Lma-053286	Leptosphaeria maculans	50.00	2.00e-12	66.60
IUUC-Mla-059171	Melampsora laricipopulina	28.71	4.00e-09	55.50
IUUC-Oba-075537	Oryza barthii	49.21	8.00e-14	68.20
IUUC-Olo-080984	Oryza longistaminata	49.21	8.00e-14	68.20
IUUC-Pop-099012	Populus trichocarpa	54.55	2.00e-34	137.00
IUUC-Sly-111375	Solanum lycopersicum	56.52	4.00e-34	136.00
IUUC-Stu-112161	Solanum tuberosum	46.01	5.00e-37	145.00
IUUC-Tme-126970	Tuber melanosporum	48.00	4.00e-13	68.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence