iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Aly-006511

Ensembl Protein ID

fgenesh2_kg.7__488__AT4G35840.1

UniProt Accession

D7MBS4; D7MBS4_ARALL

Genbank Protein ID

EFH45316.1

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

GL348719

Gene Name

ARALYDRAFT_491055

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.7__488__AT4G35840.1	fgenesh2_kg.7__488__AT4G35840.1	fgenesh2_kg.7__488__AT4G35840.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.90e-06	29.0	191	233

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++ +++lp C H+fh+ C+ +w        ++ +CP Cr
   Q: 191  CSVCLQDFqlgET-VRSLPhCHHMFHLPCIDNW------LFRHGSCPMCR 233
           ********88555.*******************......99********8 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MASSRFQSGF CPISSCPSLG NFVERIKDAC RFTLSAVLGT ILSAILTFFF ALVGTLLGAL 60
TGALIGQETE SGFIRGAAVG AISGAVFSIE VFESSLVLWK SNESRFGCLL YLIDVIVSLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTCTATCTT CTTTCTCATC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC TCTCTCTCTC 60
TCTCTCTCTC TCTCTCTCTC TTCTCTTGTA TAAGCTCCAC TGAGCTCTGT TTTCGTTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR027367--Gly-zipper_YMGG
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13441--Gly-zipper_YMGG
PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

aly:ARALYDRAFT_491055

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002941	Amborella trichopoda	46.20	1.00e-42	164.00
IUUC-Ath-007348	Arabidopsis thaliana	98.31	3.00e-122	429.00
IUUC-Bdi-014773	Brachypodium distachyon	55.88	5.00e-53	199.00
IUUC-Bol-015818	Brassica oleracea	94.04	2.00e-129	453.00
IUUC-Bra-017036	Brassica rapa	93.62	3.00e-128	449.00
IUUC-Cin-025662	Ciona intestinalis	31.97	8.00e-11	60.80
IUUC-Cne-026951	Cryptococcus neoformans	45.28	1.00e-09	57.00
IUUC-Gma-043841	Glycine max	80.52	2.00e-96	344.00
IUUC-Lpe-051237	Leersia perrieri	50.76	7.00e-59	219.00
IUUC-Mtr-058160	Medicago truncatula	80.37	1.00e-90	325.00
IUUC-Mac-064778	Musa acuminata	60.50	4.00e-71	259.00
IUUC-Oba-075390	Oryza barthii	49.75	1.00e-58	218.00
IUUC-Obr-076264	Oryza brachyantha	50.76	1.00e-58	218.00
IUUC-Ogl-077598	Oryza glaberrima	49.75	1.00e-58	218.00
IUUC-Ogu-078526	Oryza glumaepatula	49.75	1.00e-58	218.00
IUUC-Oin-079706	Oryza indica	49.75	1.00e-58	218.00
IUUC-Olo-080832	Oryza longistaminata	49.75	1.00e-58	218.00
IUUC-Ome-081142	Oryza meridionalis	49.75	1.00e-58	218.00
IUUC-Oni-082117	Oryza nivara	49.75	1.00e-58	218.00
IUUC-Opu-083964	Oryza punctata	49.75	1.00e-58	218.00
IUUC-Oru-084552	Oryza rufipogon	49.75	1.00e-58	218.00
IUUC-Osa-085950	Oryza sativa	49.75	1.00e-58	218.00
IUUC-Pop-099844	Populus trichocarpa	79.46	1.00e-105	374.00
IUUC-Ppe-101906	Prunus persica	82.16	4.00e-103	366.00
IUUC-Pte-104409	Pyrenophora teres	44.78	4.00e-11	62.40
IUUC-Sce-106223	Saccharomyces cerevisiae	36.67	7.00e-11	59.30
IUUC-Sit-110188	Setaria italica	56.85	2.00e-55	207.00
IUUC-Sbi-114329	Sorghum bicolor	50.89	2.00e-50	191.00
IUUC-Tca-121142	Theobroma cacao	81.65	5.00e-105	372.00
IUUC-Tae-122750	Triticum aestivum	54.76	2.00e-49	187.00
IUUC-Tur-126137	Triticum urartu	41.94	9.00e-39	152.00
IUUC-Vvi-131089	Vitis vinifera	79.00	4.00e-101	359.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence