iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113894

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G175900

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g024770	Sb07g024770.1	Sb07g024770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.30e-06	29.6	206	248

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++  ++lp CgH+fh  C+  w        ++++CPlCr
   Q: 206  CSVCLQDFeagET-ARSLPeCGHTFHPPCIDVW------LLRHASCPLCR 248
           ********65333.999999*************......999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDMEAAAIFG TASASFSPAP SSSRSRGGGG GTSISRLPAR VAGAVVRSLV TFVFAAVGMV 60
LGAVTGALIG LATESGLVRG AGIGAISGAV VSMEVVDSSV AIWRSDESGI WSVLYVLDVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGAAAAAGCC CTCGTCTGAC TACGCTGTGT TCATCTGCTC TGCTACGACT AAGCCAGAGC 60
TCCCACCGTC AGGTCTTCTT CTTCTTCCCC CCCTTCGCGT CCTCTCCTCT GCCTGCGCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_07g024770

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000637	Aegilops tauschii	71.63	1.00e-74	271.00
IUUC-Atr-002941	Amborella trichopoda	46.89	3.00e-40	157.00
IUUC-Ang-009565	Aspergillus niger	54.17	6.00e-10	57.80
IUUC-Bdi-014282	Brachypodium distachyon	70.44	7.00e-56	209.00
IUUC-Bra-017834	Brassica rapa	53.05	4.00e-59	220.00
IUUC-Hvu-047681	Hordeum vulgare	71.63	8.00e-75	272.00
IUUC-Lpe-051116	Leersia perrieri	75.12	1.00e-68	252.00
IUUC-Mtr-058160	Medicago truncatula	52.63	5.00e-54	203.00
IUUC-Oba-075950	Oryza barthii	74.65	8.00e-60	222.00
IUUC-Ogl-077407	Oryza glaberrima	74.65	8.00e-60	222.00
IUUC-Ogu-078930	Oryza glumaepatula	74.65	1.00e-60	225.00
IUUC-Oin-079563	Oryza indica	74.65	7.00e-60	223.00
IUUC-Ome-081578	Oryza meridionalis	74.88	1.00e-68	251.00
IUUC-Oni-082159	Oryza nivara	74.65	6.00e-60	223.00
IUUC-Opu-083894	Oryza punctata	72.35	8.00e-66	242.00
IUUC-Oru-084967	Oryza rufipogon	74.65	1.00e-60	225.00
IUUC-Osa-085796	Oryza sativa	74.65	7.00e-60	223.00
IUUC-Pop-099844	Populus trichocarpa	55.02	5.00e-63	233.00
IUUC-Ppe-101906	Prunus persica	55.02	2.00e-62	231.00
IUUC-Sit-110188	Setaria italica	83.17	5.00e-81	292.00
IUUC-Tca-121142	Theobroma cacao	54.55	2.00e-62	231.00
IUUC-Tae-124947	Triticum aestivum	71.63	1.00e-74	271.00
IUUC-Vvi-131089	Vitis vinifera	55.71	3.00e-61	227.00
IUUC-Zma-135289	Zea mays	88.84	8.00e-95	338.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence