iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131036

UUCD1 version

UUC-ViV-00453

Ensembl Protein ID

VIT_04s0023g03580.t01

UniProt Accession

F6GWM0; F6GWM0_VITVI

Genbank Protein ID

CCB44355.1

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN594959

Gene Name

ATRMR1; VIT_04s0023g03580

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_04s0023g03580	VIT_04s0023g03580.t01	VIT_04s0023g03580.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.80e-07	31.1	231	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlpCgHvfhadClqkwpglknssskefrCP 43
           C+iCled+kdg  ++vlpC+H fha+C+  w      + ++f CP
   Q: 231  CSICLEDYKDGerLRVLPCQHEFHASCVDSW----LTKWGTF-CP 270
           ********66666**************9999....3444555.66 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSTAAAKALA GILVFVSYSV RLTYAIVHLK SLSASFIDAP ARFAVSVNST GICGALHLAD 60
PLEACSSLLN RFRSQEIDTI KFALIIRGKC AFEDKVRNAQ DAGFHAVIVY DDRDKGNLVS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTATGTCG ACCGCTGCAG CCAAAGCCCT TGCTGGAATT CTAGTGTTTG TTTCTTACTC 60
TGTTCGCCTC ACCTACGCTA TTGTTCACCT CAAATCCTTG TCCGCTTCCT TCATTGACGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR003137--PA_domain
IPR001763--Rhodanese-like_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50206--RHODANESE_3
PS50089--ZF_RING_2

Pfam

PF02225--PA
PF00581--Rhodanese
PF13639--zf-RING_2

SMART

SM00450--RHOD
SM00184--RING

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0000306--C:extrinsic component of vacuolar membrane
GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding
GO:0006886--P:intracellular protein transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001413	Ailuropoda melanoleuca	32.24	1.00e-25	109.00
IUUC-Aly-006519	Arabidopsis lyrata	55.34	2.00e-76	278.00
IUUC-Ath-006590	Arabidopsis thaliana	55.21	2.00e-77	281.00
IUUC-Bdi-014479	Brachypodium distachyon	51.18	1.00e-63	235.00
IUUC-Bol-015396	Brassica oleracea	51.15	7.00e-56	209.00
IUUC-Bra-016977	Brassica rapa	53.64	4.00e-60	223.00
IUUC-Cja-018953	Callithrix jacchus	30.61	8.00e-32	130.00
IUUC-Cpo-022372	Cavia porcellus	31.58	1.00e-31	129.00
IUUC-Csa-023070	Chlorocebus sabaeus	31.17	3.00e-31	128.00
IUUC-Cho-024954	Choloepus hoffmanni	29.46	6.00e-19	87.40
IUUC-Csv-025959	Ciona savignyi	34.51	4.00e-30	124.00
IUUC-Cme-027313	Cyanidioschyzon merolae	51.61	4.00e-12	65.10
IUUC-Dno-028877	Dasypus novemcinctus	31.58	2.00e-28	118.00
IUUC-Dor-030128	Dipodomys ordii	33.16	2.00e-25	108.00
IUUC-Eca-033699	Equus caballus	31.58	3.00e-28	118.00
IUUC-Eeu-034819	Erinaceus europaeus	31.58	2.00e-28	118.00
IUUC-Fca-036168	Felis catus	32.11	6.00e-29	120.00
IUUC-Gmo-039485	Gadus morhua	32.92	1.00e-30	126.00
IUUC-Ggo-045113	Gorilla gorilla	31.17	4.00e-31	127.00
IUUC-Hsa-046476	Homo sapiens	31.17	4.00e-31	127.00
IUUC-Laf-053687	Loxodonta africana	31.58	2.00e-28	119.00
IUUC-Mcc-055879	Macaca mulatta	31.17	3.00e-31	127.00
IUUC-Meu-056408	Macropus eugenii	31.70	1.00e-24	106.00
IUUC-Mmr-060656	Microcebus murinus	32.11	1.00e-31	129.00
IUUC-Mdo-062795	Monodelphis domestica	30.86	2.00e-29	122.00
IUUC-Mmu-063722	Mus musculus	31.98	5.00e-32	130.00
IUUC-Mac-064759	Musa acuminata	55.91	1.00e-69	255.00
IUUC-Mpu-066094	Mustela putorius furo	31.84	4.00e-27	114.00
IUUC-Mlu-067350	Myotis lucifugus	31.17	2.00e-27	115.00
IUUC-Nle-069971	Nomascus leucogenys	31.17	3.00e-31	128.00
IUUC-Opr-070767	Ochotona princeps	28.69	1.00e-16	79.70
IUUC-Oan-073710	Ornithorhynchus anatinus	30.83	2.00e-26	112.00
IUUC-Ocu-074157	Oryctolagus cuniculus	31.98	9.00e-32	129.00
IUUC-Oga-089169	Otolemur garnettii	32.11	2.00e-31	129.00
IUUC-Oar-089216	Ovis aries	31.58	2.00e-31	128.00
IUUC-Ptr-091493	Pan troglodytes	31.17	4.00e-31	127.00
IUUC-Pan-092215	Papio anubis	31.17	2.00e-31	128.00
IUUC-Pab-097739	Pongo abelii	31.80	3.00e-31	128.00
IUUC-Pop-099688	Populus trichocarpa	57.43	3.00e-73	267.00
IUUC-Pca-100609	Procavia capensis	32.24	1.00e-25	109.00
IUUC-Ppe-101605	Prunus persica	58.21	2.00e-85	307.00
IUUC-Pva-102834	Pteropus vampyrus	31.58	4.00e-28	117.00
IUUC-Rno-106080	Rattus norvegicus	31.98	1.00e-31	129.00
IUUC-Sha-106787	Sarcophilus harrisii	30.11	2.00e-29	121.00
IUUC-Sja-107935	Schizosaccharomyces japonicus	30.04	1.00e-17	83.20
IUUC-Spo-108083	Schizosaccharomyces pombe	25.00	2.00e-14	72.80
IUUC-Sit-110745	Setaria italica	52.23	6.00e-65	239.00
IUUC-Sar-113580	Sorex araneus	29.39	3.00e-22	98.60
IUUC-Ssc-115900	Sus scrofa	31.71	3.00e-31	128.00
IUUC-Tni-120357	Tetraodon nigroviridis	31.47	1.00e-26	113.00
IUUC-Tca-121333	Theobroma cacao	57.09	3.00e-76	277.00
IUUC-Tae-124530	Triticum aestivum	52.28	2.00e-61	228.00
IUUC-Tbe-127812	Tupaia belangeri	31.42	5.00e-27	114.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence