iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111082

Ensembl Protein ID

Solyc01g014230.2.1

UniProt Accession

K4AU60; K4AU60_SOLLC

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g014230.2	Solyc01g014230.2.1	Solyc01g014230.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.90e-30	103.9	229	301

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+Cp+slelM+dPv+++sG+ty+r+ I++w++ g + cP+trq+l +++l+Pn+t+++li +wce n++
   Q: 229  IPPDFCCPLSLELMTDPVIVASGQTYERAFIRRWIDLGLTVCPKTRQTLGHTNLIPNYTVKALIANWCEINDV 301
           8*******************************************************************98876 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MLLNNISCFC HLSSSDHMSG ELVRRYYCKI EDILKLVKPI LDSIVDVEEA SSELLLKAFA 60
GLAQHVDELR ELFETWEPLC SKIYFVLQAE PLIGKIRTCS LEVLELLKSS HKSLPADVTL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTAAAGAT GCTTCTCAAT AATATCTCCT GTTTTTGCCA TTTATCATCA AGTGATCACA 60
TGAGTGGTGA ACTGGTCCGT AGATATTACT GTAAGATTGA GGATATACTG AAGCTTGTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000760	Aegilops tauschii	47.49	0.00e+00	658.00
IUUC-Aml-001718	Ailuropoda melanoleuca	26.11	2.00e-09	57.80
IUUC-Atr-002793	Amborella trichopoda	55.63	0.00e+00	841.00
IUUC-Aly-006261	Arabidopsis lyrata	57.97	0.00e+00	852.00
IUUC-Ath-006925	Arabidopsis thaliana	57.28	0.00e+00	850.00
IUUC-Ago-007854	Ashbya gossypii	31.78	2.00e-16	80.10
IUUC-Bgr-012235	Blumeria graminis	31.14	5.00e-19	88.20
IUUC-Bdi-014751	Brachypodium distachyon	50.42	0.00e+00	697.00
IUUC-Bol-015762	Brassica oleracea	79.20	2.00e-147	515.00
IUUC-Bra-018049	Brassica rapa	70.13	4.00e-147	515.00
IUUC-Fca-035957	Felis catus	27.39	4.00e-10	59.70
IUUC-Ggr-039908	Gaeumannomyces graminis	31.38	8.00e-20	91.30
IUUC-Gma-043920	Glycine max	59.78	0.00e+00	886.00
IUUC-Hvu-047089	Hordeum vulgare	50.83	0.00e+00	731.00
IUUC-Itr-048617	Ictidomys tridecemlineatus	26.11	4.00e-09	56.60
IUUC-Kpa-049403	Komagataella pastoris	31.62	1.00e-20	94.00
IUUC-Lpe-051326	Leersia perrieri	52.04	0.00e+00	702.00
IUUC-Lma-053243	Leptosphaeria maculans	31.08	1.00e-21	97.80
IUUC-Mpo-057354	Magnaporthe poae	31.38	7.00e-20	91.30
IUUC-Mtr-057910	Medicago truncatula	60.55	0.00e+00	883.00
IUUC-Mac-064791	Musa acuminata	81.88	9.00e-137	479.00
IUUC-Oba-075484	Oryza barthii	53.09	0.00e+00	664.00
IUUC-Obr-076317	Oryza brachyantha	52.16	0.00e+00	669.00
IUUC-Ogl-077857	Oryza glaberrima	53.09	0.00e+00	665.00
IUUC-Ogu-078826	Oryza glumaepatula	53.09	0.00e+00	666.00
IUUC-Oin-079538	Oryza indica	52.96	0.00e+00	665.00
IUUC-Olo-080425	Oryza longistaminata	52.07	0.00e+00	634.00
IUUC-Ome-081524	Oryza meridionalis	52.84	0.00e+00	663.00
IUUC-Oni-082077	Oryza nivara	52.96	0.00e+00	663.00
IUUC-Opu-083165	Oryza punctata	52.72	0.00e+00	680.00
IUUC-Oru-085180	Oryza rufipogon	52.96	0.00e+00	681.00
IUUC-Osa-085315	Oryza sativa	52.96	0.00e+00	680.00
IUUC-Pno-095110	Phaeosphaeria nodorum	31.38	1.00e-20	94.00
IUUC-Ppa-095860	Physcomitrella patens	55.20	2.00e-112	399.00
IUUC-Pop-099220	Populus trichocarpa	66.93	0.00e+00	771.00
IUUC-Pca-100151	Procavia capensis	25.48	1.00e-08	54.70
IUUC-Pte-104314	Pyrenophora teres	31.38	7.00e-21	94.70
IUUC-Smo-108857	Selaginella moellendorffii	61.32	4.00e-88	318.00
IUUC-Sit-110349	Setaria italica	52.64	0.00e+00	719.00
IUUC-Sbi-114085	Sorghum bicolor	73.97	5.00e-142	497.00
IUUC-Tca-121129	Theobroma cacao	67.00	0.00e+00	1028.00
IUUC-Tae-124684	Triticum aestivum	50.42	0.00e+00	728.00
IUUC-Tur-126525	Triticum urartu	45.06	0.00e+00	638.00
IUUC-Vvi-131364	Vitis vinifera	65.97	0.00e+00	981.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence