iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114535

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G083300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g006870	Sb04g006870.1	Sb04g006870.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	49.49	9.00e-158	554.00	IUUC-Ath-006790
E3 adaptor/Cullin RING/SCF/F-box	25.12	1.00e-24	109.00	IUUC-Ots-000001

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MPALYAYGDG GCLVSAPAEL SGLFCRGAVQ QRKRTLVAAS AVAVAAAAEC VRAAKKQRQQ 60
LPLPLPSLDA LPDECLFEIL RRVPGGRGRG ASACVSRRWL ALLGSIRASE LGQAAAAADT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTTTTTTCCC TGTCGCCGGC GGCGATAGGG TTCCGTTTTC CTTGCTCCGG CGGGCCGTAG 60
ATGCTTCCGG CCCTCTCCGG CGCCTCAGAT CCGGCGGTGA CCGTGCTCTT GTTCGTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR032675--L_dom-like
IPR001611--Leu-rich_rpt
IPR006553--Leu-rich_rpt_Cys-con_subtyp

Pfam

PF00646--F-box
PF13516--LRR_6

SMART

SM00367--LRR_CC

KEGG

sbi:SORBI_04g006870

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000881	Aegilops tauschii	84.65	0.00e+00	1018.00
IUUC-Atr-002552	Amborella trichopoda	52.62	6.00e-162	563.00
IUUC-Aly-006311	Arabidopsis lyrata	50.25	2.00e-156	545.00
IUUC-Ath-006790	Arabidopsis thaliana	49.92	3.00e-155	541.00
IUUC-Ago-007921	Ashbya gossypii	25.07	4.00e-21	96.30
IUUC-Bci-013599	Botrytis cinerea	24.07	2.00e-25	110.00
IUUC-Bdi-014596	Brachypodium distachyon	81.49	0.00e+00	986.00
IUUC-Bol-015153	Brassica oleracea	48.73	1.00e-148	519.00
IUUC-Bra-017379	Brassica rapa	48.31	5.00e-144	503.00
IUUC-Cfa-021192	Canis familiaris	25.23	1.00e-31	130.00
IUUC-Csv-026303	Ciona savignyi	26.07	3.00e-29	122.00
IUUC-Dor-030835	Dipodomys ordii	34.48	8.00e-16	77.40
IUUC-Fca-035625	Felis catus	25.23	5.00e-29	122.00
IUUC-Fox-037823	Fusarium oxysporum	21.83	1.00e-26	114.00
IUUC-Fso-038381	Fusarium solani	22.73	1.00e-28	120.00
IUUC-Gma-042946	Glycine max	50.25	3.00e-164	570.00
IUUC-Hvu-047403	Hordeum vulgare	86.21	0.00e+00	900.00
IUUC-Kpa-049356	Komagataella pastoris	23.99	1.00e-23	104.00
IUUC-Lpe-051075	Leersia perrieri	83.05	0.00e+00	988.00
IUUC-Loc-052402	Lepisosteus oculatus	25.56	2.00e-32	132.00
IUUC-Mor-057058	Magnaporthe oryzae	23.10	3.00e-26	113.00
IUUC-Mpo-057320	Magnaporthe poae	24.87	7.00e-29	121.00
IUUC-Mtr-057658	Medicago truncatula	51.33	4.00e-163	566.00
IUUC-Mac-065656	Musa acuminata	57.77	0.00e+00	638.00
IUUC-Mlu-067940	Myotis lucifugus	25.23	2.00e-26	113.00
IUUC-Ocu-073848	Oryctolagus cuniculus	24.78	2.00e-29	123.00
IUUC-Oba-075482	Oryza barthii	81.95	0.00e+00	983.00
IUUC-Obr-076655	Oryza brachyantha	86.15	0.00e+00	799.00
IUUC-Ogl-077627	Oryza glaberrima	82.11	0.00e+00	984.00
IUUC-Ogu-078848	Oryza glumaepatula	80.30	0.00e+00	977.00
IUUC-Oin-079776	Oryza indica	84.90	0.00e+00	947.00
IUUC-Olo-080728	Oryza longistaminata	85.00	0.00e+00	791.00
IUUC-Ome-081750	Oryza meridionalis	81.87	0.00e+00	994.00
IUUC-Oni-082957	Oryza nivara	81.35	0.00e+00	982.00
IUUC-Opu-083568	Oryza punctata	83.18	0.00e+00	956.00
IUUC-Oru-084584	Oryza rufipogon	81.02	0.00e+00	976.00
IUUC-Osa-085423	Oryza sativa	81.02	0.00e+00	976.00
IUUC-Olu-087656	Ostreococcus lucimarinus	27.78	4.00e-05	41.20
IUUC-Oga-089110	Otolemur garnettii	23.79	3.00e-26	112.00
IUUC-Oar-089635	Ovis aries	24.51	3.00e-23	103.00
IUUC-Pma-094494	Petromyzon marinus	29.16	3.00e-27	115.00
IUUC-Ppa-095810	Physcomitrella patens	32.14	2.00e-82	299.00
IUUC-Pab-098377	Pongo abelii	25.27	1.00e-28	120.00
IUUC-Pop-099453	Populus trichocarpa	53.14	4.00e-168	583.00
IUUC-Ppe-101207	Prunus persica	51.69	3.00e-167	580.00
IUUC-Pva-102941	Pteropus vampyrus	25.16	2.00e-30	127.00
IUUC-Ptt-103850	Puccinia triticina	24.43	1.00e-09	57.40
IUUC-Sha-107390	Sarcophilus harrisii	25.05	3.00e-30	125.00
IUUC-Smo-109612	Selaginella moellendorffii	34.63	1.00e-93	336.00
IUUC-Sit-110627	Setaria italica	92.99	0.00e+00	1119.00
IUUC-Sly-111356	Solanum lycopersicum	51.19	8.00e-163	566.00
IUUC-Stu-112036	Solanum tuberosum	50.63	3.00e-171	594.00
IUUC-Tsy-119620	Tarsius syrichta	24.12	8.00e-28	118.00
IUUC-Tca-121078	Theobroma cacao	53.31	4.00e-161	560.00
IUUC-Tae-125289	Triticum aestivum	84.19	0.00e+00	1005.00
IUUC-Tur-126530	Triticum urartu	87.02	0.00e+00	796.00
IUUC-Tbe-128120	Tupaia belangeri	24.84	6.00e-28	118.00
IUUC-Vvi-131401	Vitis vinifera	51.31	2.00e-154	538.00
IUUC-Yli-134644	Yarrowia lipolytica	22.78	4.00e-19	89.40

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence