iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
fgenesh2_kg.8__2496__AT5G64660.1	fgenesh2_kg.8__2496__AT5G64660.1	fgenesh2_kg.8__2496__AT5G64660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.00e-28	99.9	10	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           vp +f+CpIsl++M+ Pv l++G+tydr+sI++wl+ g++tcP t+q l+++d++Pn tl+rli+ w ++ 
   Q: 10   VPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNRTLQRLIEIWSDSV 80
           89*****************************************************************9875 PP

Organism

Arabidopsis lyrata

Protein Sequence
(Fasta)

MRKDDLCITV PTFFRCPISL DVMKSPVSLC TGVTYDRASI QRWLDGGNNT CPATMQILQN 60
KDFIPNRTLQ RLIEIWSDSV RRRVCVESAE LAAPTRDEIT DAIDRVKIEK EERDDREVLS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCTTTTGG AGCAAATCGG AAAACAAAAA ATCAACGGCC AAAGCAATGA GGAAGGATGA 60
TCTCTGCATC ACTGTTCCTA CGTTCTTCCG ATGTCCTATA TCACTCGACG TTATGAAATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

KEGG

aly:ARALYDRAFT_496680

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	45.50	4.00e-93	334.00
IUUC-Ath-007332	Arabidopsis thaliana	94.05	0.00e+00	724.00
IUUC-Bol-015831	Brassica oleracea	88.78	0.00e+00	727.00
IUUC-Bra-017320	Brassica rapa	89.50	0.00e+00	702.00
IUUC-Gma-042668	Glycine max	52.56	1.00e-114	405.00
IUUC-Hvu-047178	Hordeum vulgare	46.22	1.00e-25	108.00
IUUC-Mtr-057795	Medicago truncatula	55.04	1.00e-122	432.00
IUUC-Oba-075887	Oryza barthii	46.67	3.00e-29	120.00
IUUC-Ogu-078852	Oryza glumaepatula	38.15	2.00e-31	129.00
IUUC-Oin-079861	Oryza indica	38.15	2.00e-31	129.00
IUUC-Ome-081099	Oryza meridionalis	39.18	2.00e-31	129.00
IUUC-Oni-083066	Oryza nivara	38.15	2.00e-31	129.00
IUUC-Pop-099916	Populus trichocarpa	51.29	7.00e-113	399.00
IUUC-Ppe-101668	Prunus persica	53.86	7.00e-121	426.00
IUUC-Sly-111549	Solanum lycopersicum	47.59	4.00e-100	357.00
IUUC-Stu-112738	Solanum tuberosum	47.59	1.00e-99	355.00
IUUC-Sre-115187	Sporisorium reilianum	46.51	3.00e-07	48.50
IUUC-Tca-121270	Theobroma cacao	54.03	1.00e-113	402.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence