iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014371

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000882

Gene Name

LOC100826055; BRADI_3g45250

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G45250	BRADI3G45250.1	BRADI3G45250.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	6.90e-30	103.5	20	90

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           +vp+ f+CpIsl++Mr Pv l++Gitydr+sI++w++sg++tcP t+q+l ++dlvPnltl rli  w ++
   Q: 20   KVPSLFRCPISLDVMRSPVSLCTGITYDRASIQRWFDSGNNTCPATMQTLPSTDLVPNLTLGRLIALWAST 90
           589*****************************************************************886 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MGRKETSGRL SAEYHGLEVK VPSLFRCPIS LDVMRSPVSL CTGITYDRAS IQRWFDSGNN 60
TCPATMQTLP STDLVPNLTL GRLIALWAST GASGASSLAP SPVGPTPAAA AADLLRRIAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCCCACTTC TCTCCGCAAC GGCCAACTGC CCAACTGCTT TGCAAACAAC ACAAATAGCA 60
CTACAGACTA CAGAGAGCTC AGGCATCCAC TCATTCATGG GAAGGAAGGA GACAAGCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

bdi:100826055

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	34.77	2.00e-66	245.00
IUUC-Aly-006554	Arabidopsis lyrata	30.72	6.00e-53	200.00
IUUC-Ath-006814	Arabidopsis thaliana	31.81	9.00e-51	193.00
IUUC-Bol-015229	Brassica oleracea	33.48	1.00e-53	203.00
IUUC-Bra-016947	Brassica rapa	33.12	2.00e-52	199.00
IUUC-Gma-043716	Glycine max	36.59	2.00e-65	242.00
IUUC-Mtr-057795	Medicago truncatula	37.27	3.00e-70	258.00
IUUC-Oba-075887	Oryza barthii	76.47	2.00e-49	187.00
IUUC-Obr-076848	Oryza brachyantha	76.05	6.00e-61	226.00
IUUC-Ogu-078852	Oryza glumaepatula	64.45	1.00e-131	462.00
IUUC-Oin-079861	Oryza indica	64.03	2.00e-132	464.00
IUUC-Ome-081099	Oryza meridionalis	66.23	9.00e-129	452.00
IUUC-Oni-083066	Oryza nivara	64.03	2.00e-132	464.00
IUUC-Opu-083818	Oryza punctata	67.89	4.00e-128	450.00
IUUC-Oru-085038	Oryza rufipogon	62.92	9.00e-123	432.00
IUUC-Osa-086178	Oryza sativa	66.59	5.00e-127	447.00
IUUC-Pop-099916	Populus trichocarpa	36.04	6.00e-67	247.00
IUUC-Sit-110134	Setaria italica	62.50	5.00e-95	340.00
IUUC-Sly-111549	Solanum lycopersicum	33.71	1.00e-60	226.00
IUUC-Sbi-113917	Sorghum bicolor	60.81	3.00e-115	407.00
IUUC-Sre-115187	Sporisorium reilianum	46.51	1.00e-06	46.60
IUUC-Tca-121270	Theobroma cacao	35.23	2.00e-62	232.00
IUUC-Vvi-131751	Vitis vinifera	37.98	2.00e-77	281.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence