iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-042668

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000841

Gene Name

LOC100799627; GLYMA_08G147200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA08G15580	GLYMA08G15580.1	GLYMA08G15580.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.40e-29	103.5	10	79

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawcee 71
           vp++f+CpIsl++M+ Pv l++G+tydrssI++wl++g++tcP t+q l+ +d+vPn tl+rliq w ++
   Q: 10   VPSFFRCPISLDVMKSPVSLCTGVTYDRSSIQRWLDNGNNTCPATMQVLQTTDFVPNRTLQRLIQIWSDS 79
           8******************************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MVRDDLCITV PSFFRCPISL DVMKSPVSLC TGVTYDRSSI QRWLDNGNNT CPATMQVLQT 60
TDFVPNRTLQ RLIQIWSDSV THRVDSPDSP TSTESQSLLS KDHILVAISD LHTRSDNRFN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATAACATAA CCACTCTCCC TTTGACCGTA GACCAACCCC CAAAATAAGA AATATATTCA 60
AAAACTCATA AAGGAAGAGC ATCTGACGTC ACCGTACCTT TGACTCTCTC TCTCTCTTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100799627

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	50.72	2.00e-111	395.00
IUUC-Aly-005744	Arabidopsis lyrata	53.24	2.00e-110	392.00
IUUC-Ath-007332	Arabidopsis thaliana	54.06	7.00e-111	394.00
IUUC-Bol-015831	Brassica oleracea	53.02	2.00e-120	425.00
IUUC-Bra-017320	Brassica rapa	53.27	5.00e-115	407.00
IUUC-Mtr-057795	Medicago truncatula	78.77	0.00e+00	649.00
IUUC-Mac-064700	Musa acuminata	39.02	1.00e-56	213.00
IUUC-Obr-076531	Oryza brachyantha	67.24	3.00e-20	92.80
IUUC-Pop-099916	Populus trichocarpa	56.50	2.00e-130	458.00
IUUC-Ppe-101668	Prunus persica	62.30	2.00e-141	495.00
IUUC-Sit-110583	Setaria italica	45.41	2.00e-33	136.00
IUUC-Tca-121270	Theobroma cacao	59.81	9.00e-130	456.00
IUUC-Vvi-131751	Vitis vinifera	64.59	1.00e-152	532.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence