iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Osa-086178

UUCD1 version

UUC-OrS-00940

Ensembl Protein ID

OS02T0540700-00

UniProt Accession

Q6ETF7; Q6ETF7_ORYSJ

Genbank Protein ID

BAD28063.1; BAF08976.1; BAS79097.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

AP004847; AP008208; AP014958

Gene Name

Os02g0540700; OJ1298_H07.14; OSNPB_020540700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OS02G0540700	OS02T0540700-00	OS02T0540700-00

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/U-box	U-box	24486490

Classification

Family	E-value	Score	Start	End
E3 activity/RING/U-box	3.40e-31	108.1	74	146

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +vp +f+CpIsl++Mr Pv l++G+tydr+sI++w++sg++tcP t+ pl ++dlvPnltlrrli  w ++ +
   Q: 74   KVPTFFRCPISLDVMRSPVSLCTGVTYDRASIQRWIDSGNTTCPATMLPLPSTDLVPNLTLRRLIALWASTAA 146
           589*****************************************************************99875 PP

Organism

Oryza sativa

Protein Sequence
(Fasta)

MDPSSSSSSS SPFSTPFHSI SSTSTLRPQL AIAIVATPSV CGRNEIEQQP SMVRKEMGGG 60
GGRLAAEYQG LEVKVPTFFR CPISLDVMRS PVSLCTGVTY DRASIQRWID SGNTTCPATM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACCCCT CATCCTCCTC CTCCTCCTCC TCTCCCTTTT CTACTCCATT CCATTCCATC 60
TCCTCCACTT CCACCCTCAG GCCTCAGCTC GCCATCGCCA TTGTTGCAAC ACCAAGTGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002532	Amborella trichopoda	35.81	1.00e-67	249.00
IUUC-Aly-006554	Arabidopsis lyrata	32.13	8.00e-51	193.00
IUUC-Ath-006814	Arabidopsis thaliana	32.13	5.00e-52	197.00
IUUC-Bdi-014371	Brachypodium distachyon	66.81	7.00e-137	479.00
IUUC-Bol-015298	Brassica oleracea	80.30	2.00e-29	122.00
IUUC-Bra-017320	Brassica rapa	34.54	3.00e-58	218.00
IUUC-Gma-044154	Glycine max	38.46	8.00e-36	143.00
IUUC-Mtr-057795	Medicago truncatula	36.53	2.00e-66	245.00
IUUC-Mac-064700	Musa acuminata	50.34	8.00e-90	322.00
IUUC-Oba-075887	Oryza barthii	98.37	1.00e-59	221.00
IUUC-Obr-076848	Oryza brachyantha	83.07	4.00e-71	259.00
IUUC-Ogl-077083	Oryza glaberrima	84.12	7.00e-105	373.00
IUUC-Ogu-078852	Oryza glumaepatula	87.55	0.00e+00	628.00
IUUC-Oin-079861	Oryza indica	87.12	2.00e-180	624.00
IUUC-Olo-080339	Oryza longistaminata	76.44	6.00e-75	272.00
IUUC-Ome-081099	Oryza meridionalis	89.30	4.00e-177	613.00
IUUC-Oni-083066	Oryza nivara	87.12	2.00e-180	624.00
IUUC-Opu-083818	Oryza punctata	88.77	1.00e-158	551.00
IUUC-Oru-085038	Oryza rufipogon	95.23	0.00e+00	669.00
IUUC-Pop-099916	Populus trichocarpa	35.02	3.00e-66	244.00
IUUC-Ppe-101668	Prunus persica	38.48	3.00e-68	251.00
IUUC-Sit-110583	Setaria italica	69.52	4.00e-127	447.00
IUUC-Sly-111549	Solanum lycopersicum	36.53	1.00e-62	232.00
IUUC-Stu-112738	Solanum tuberosum	35.71	3.00e-61	228.00
IUUC-Sbi-113917	Sorghum bicolor	73.09	7.00e-129	452.00
IUUC-Sre-115187	Sporisorium reilianum	42.55	2.00e-06	45.40
IUUC-Tca-121270	Theobroma cacao	35.21	2.00e-63	235.00
IUUC-Vvi-131751	Vitis vinifera	37.95	2.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence