iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ssc-116391

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CU550694

Gene Name

HERC1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSSCG00000004561.2	ENSSSCT00000005038.2	ENSSSCP00000004918.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-16	59.7	3426	3456
E3 activity/HECT	4.40e-93	312.6	4506	4840

Active Site

Position(s)	Description	Evidence
4809	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00104}

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tds.vtclaf.sd.tllvsGsdDgtikvWDlr 31
           +++ +tc+ + +  +ll+++++Dgti+vW+++
   Q: 3426 QNRvMTCV-WcNKkGLLATSGNDGTIRVWNVT 3456
           55416677.*9778****************97 PP

E3 activity/HECT

   S: 6    kkrle.vefvgEegldlgGvtreflallskelqnpdlglflysendketlqpnpdsglknp.....ehlklFeflGrllgkalqdgr 86
            +r++ v++vgE + d+gGv+ ++++++++el++  + l+  s+n ++++ +n+d++l np     ehl  F+flG+l+g+a+++++
   Q: 4506 PSRAWkVKLVGEGADDAGGVFDDTITEMCQELETGIVDLLIPSPNATAEVGYNRDRFLFNPsacldEHLMQFKFLGILMGVAIRTKK 4592
           466666********************************************************************************* PP
   S: 87   lldlplsksfyklllgkklsledleevdpelykslkeikenaesdieelgldltfsvseeilgetkeee..LkpgGenipVtneNke 171
           +ldl+l++ ++k+l+ ++l+ledleevd  ++++l++i++ ++s i+e++++ ++  ++ + ++++ ++  ++pgG++ip t +N++
   Q: 4593 PLDLHLAPLVWKQLCCVPLTLEDLEEVDLLYVQTLNSILHIEDSGITEESFHEMIPLDSFVGQSADGKMvpIIPGGNSIPLTFSNRK 4679
           *******************************************************9999887777766666**************** PP
   S: 172  eYvklvveyrlkegikeqveafreGfneviplellslFteeelellicGeeeidvedlkketkykggytedspaiqwFwevleefss 258
           eYv++ +eyrl+e +++qv+a+reG+++++p  llsl+t+++le+++cG++ei+ve lkk  +y++ + e+++ +qwFw++leefs+
   Q: 4680 EYVERAIEYRLHE-MDRQVAAVREGMSWIVPVPLLSLLTAKQLEQMVCGMPEISVEVLKKVVRYRE-VDEQHQLVQWFWHTLEEFSN 4764
           *************.**************************************************88.******************** PP
   S: 259  eerkafLqFvTgssrlPlgGfaelkprlfvirk.dasddrlPssnTCfnyLkLPeYsskeilkekLlyAieetkgFel 335
           eer  f++Fv+g+srlP+ + a+++ ++f+i k d+  d+lP+s+TCf++L+LP+Yss+ ++ e+L+yAi++++++++
   Q: 4765 EERVLFMRFVSGRSRLPA-NTADIS-QRFQIMKvDRPYDSLPTSQTCFFQLRLPPYSSQLVMAERLRYAINNCRSIDM 4840
           *****************6.899999.679999956666***********************************99987 PP

Organism

Sus scrofa

Protein Sequence
(Fasta)

MATMVPPVKL KWLEHLNSSW ITEDSESIAT REGVAVLYSK LVSNKEVVPL PQQVLCLKGP 60
QLPDFERESL SSDEQDHYLD ALLSSQLALA KMVCSDSPFA GALRKRLLVL QRVFYALSNK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAACAA TGGTTCCACC AGTGAAACTG AAATGGCTTG AACACCTCAA CAGCTCCTGG 60
ATTACTGAGG ACAGTGAATC TATTGCTACA AGAGAGGGGG TTGCTGTTCT ATATTCTAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0853--WD repeat

Interpro

IPR001870--B30.2/SPRY
IPR013320--ConA-like_dom
IPR000569--HECT_dom
IPR016106--Pyr-dep_his-deCO2ase_subdom
IPR009091--RCC1/BLIP-II
IPR000408--Reg_chr_condens
IPR003877--SPRY_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50188--B302_SPRY
PS50237--HECT
PS00626--RCC1_2
PS50012--RCC1_3
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00632--HECT
PF00415--RCC1
PF00622--SPRY
PF00400--WD40

PRINTS

PR00633--RCCNDNSATION

SMART

SM00119--HECTc
SM00449--SPRY
SM00320--WD40

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0021702--P:cerebellar Purkinje cell differentiation
GO:0010507--P:negative regulation of autophagy
GO:0050885--P:neuromuscular process controlling balance
GO:0031175--P:neuron projection development

KEGG

ssc:100153537

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001830	Ailuropoda melanoleuca	98.23	0.00e+00	8855.00
IUUC-Atr-003065	Amborella trichopoda	32.99	1.00e-48	188.00
IUUC-Apl-003461	Anas platyrhynchos	93.02	0.00e+00	8430.00
IUUC-Aca-004452	Anolis carolinensis	85.39	0.00e+00	7453.00
IUUC-Aly-006545	Arabidopsis lyrata	36.66	6.00e-49	189.00
IUUC-Ame-011268	Astyanax mexicanus	60.99	0.00e+00	2244.00
IUUC-Bta-013213	Bos taurus	98.72	0.00e+00	8882.00
IUUC-Bdi-014791	Brachypodium distachyon	34.99	1.00e-52	200.00
IUUC-Bol-015203	Brassica oleracea	35.36	2.00e-50	194.00
IUUC-Bra-017584	Brassica rapa	34.63	5.00e-50	193.00
IUUC-Cja-019298	Callithrix jacchus	98.00	0.00e+00	8866.00
IUUC-Cfa-021213	Canis familiaris	98.33	0.00e+00	8958.00
IUUC-Cpo-021674	Cavia porcellus	96.32	0.00e+00	5955.00
IUUC-Cre-023014	Chlamydomonas reinhardtii	38.76	2.00e-50	192.00
IUUC-Csa-023341	Chlorocebus sabaeus	97.78	0.00e+00	8835.00
IUUC-Cho-024567	Choloepus hoffmanni	96.33	0.00e+00	1813.00
IUUC-Dre-028289	Danio rerio	79.30	0.00e+00	7138.00
IUUC-Dno-029988	Dasypus novemcinctus	97.49	0.00e+00	8785.00
IUUC-Dor-030636	Dipodomys ordii	94.53	0.00e+00	2147.00
IUUC-Ete-032598	Echinops telfairi	85.31	0.00e+00	1374.00
IUUC-Eca-033754	Equus caballus	98.42	0.00e+00	8892.00
IUUC-Eeu-034702	Erinaceus europaeus	92.33	0.00e+00	1522.00
IUUC-Fca-035900	Felis catus	98.75	0.00e+00	8932.00
IUUC-Fal-037034	Ficedula albicollis	90.97	0.00e+00	7239.00
IUUC-Gmo-039260	Gadus morhua	75.23	0.00e+00	1272.00
IUUC-Gga-040321	Gallus gallus	93.01	0.00e+00	8496.00
IUUC-Gac-042444	Gasterosteus aculeatus	57.35	0.00e+00	2227.00
IUUC-Gma-043808	Glycine max	33.94	1.00e-46	181.00
IUUC-Ggo-045134	Gorilla gorilla	93.08	0.00e+00	4791.00
IUUC-Hsa-046516	Homo sapiens	97.96	0.00e+00	8829.00
IUUC-Hvu-047529	Hordeum vulgare	35.67	6.00e-49	189.00
IUUC-Itr-048914	Ictidomys tridecemlineatus	97.99	0.00e+00	2578.00
IUUC-Lch-049903	Latimeria chalumnae	87.15	0.00e+00	7955.00
IUUC-Lpe-051165	Leersia perrieri	33.83	1.00e-50	194.00
IUUC-Loc-052149	Lepisosteus oculatus	84.52	0.00e+00	7574.00
IUUC-Laf-053426	Loxodonta africana	97.80	0.00e+00	8870.00
IUUC-Mcc-055826	Macaca mulatta	98.07	0.00e+00	8889.00
IUUC-Meu-056521	Macropus eugenii	86.10	0.00e+00	2291.00
IUUC-Mtr-058277	Medicago truncatula	34.95	2.00e-52	199.00
IUUC-Mga-059567	Meleagris gallopavo	96.18	0.00e+00	2127.00
IUUC-Mmr-061512	Microcebus murinus	97.78	0.00e+00	8776.00
IUUC-Mdo-062177	Monodelphis domestica	92.45	0.00e+00	8359.00
IUUC-Mmu-064373	Mus musculus	97.45	0.00e+00	8801.00
IUUC-Mpu-066148	Mustela putorius furo	97.92	0.00e+00	8849.00
IUUC-Mlu-067680	Myotis lucifugus	97.88	0.00e+00	8807.00
IUUC-Nle-069633	Nomascus leucogenys	97.82	0.00e+00	8789.00
IUUC-Opr-070609	Ochotona princeps	95.84	0.00e+00	1457.00
IUUC-Ont-071249	Oreochromis niloticus	81.64	0.00e+00	7519.00
IUUC-Oan-073157	Ornithorhynchus anatinus	93.86	0.00e+00	8465.00
IUUC-Ocu-074841	Oryctolagus cuniculus	97.90	0.00e+00	8922.00
IUUC-Oba-075262	Oryza barthii	33.92	5.00e-49	188.00
IUUC-Obr-076115	Oryza brachyantha	34.35	8.00e-49	187.00
IUUC-Ogl-077586	Oryza glaberrima	33.92	6.00e-49	187.00
IUUC-Ogu-078796	Oryza glumaepatula	33.67	2.00e-48	186.00
IUUC-Oin-079298	Oryza indica	33.67	2.00e-48	186.00
IUUC-Olo-080768	Oryza longistaminata	35.07	1.00e-53	203.00
IUUC-Ome-081908	Oryza meridionalis	34.45	6.00e-48	184.00
IUUC-Oni-082049	Oryza nivara	33.67	2.00e-48	186.00
IUUC-Opu-083608	Oryza punctata	33.42	1.00e-49	190.00
IUUC-Oru-084712	Oryza rufipogon	33.67	2.00e-48	186.00
IUUC-Osa-086078	Oryza sativa	33.67	2.00e-48	186.00
IUUC-Ola-086889	Oryzias latipes	80.24	0.00e+00	7338.00
IUUC-Oga-088459	Otolemur garnettii	97.15	0.00e+00	8783.00
IUUC-Oar-089888	Ovis aries	98.66	0.00e+00	8838.00
IUUC-Ptr-091114	Pan troglodytes	98.03	0.00e+00	8860.00
IUUC-Pan-092442	Papio anubis	97.94	0.00e+00	8864.00
IUUC-Psi-093833	Pelodiscus sinensis	92.35	0.00e+00	5526.00
IUUC-Pma-094275	Petromyzon marinus	77.72	0.00e+00	1743.00
IUUC-Ppa-095790	Physcomitrella patens	36.08	3.00e-55	208.00
IUUC-Pfo-097262	Poecilia formosa	80.44	0.00e+00	7203.00
IUUC-Pab-097760	Pongo abelii	97.89	0.00e+00	5017.00
IUUC-Pop-099121	Populus trichocarpa	36.92	4.00e-52	200.00
IUUC-Pca-100465	Procavia capensis	96.78	0.00e+00	4640.00
IUUC-Ppe-101345	Prunus persica	34.27	2.00e-52	201.00
IUUC-Pva-102950	Pteropus vampyrus	97.41	0.00e+00	4166.00
IUUC-Rno-104892	Rattus norvegicus	97.24	0.00e+00	8715.00
IUUC-Sha-106633	Sarcophilus harrisii	94.05	0.00e+00	8372.00
IUUC-Smo-108827	Selaginella moellendorffii	35.66	4.00e-52	200.00
IUUC-Sit-110415	Setaria italica	36.15	4.00e-53	201.00
IUUC-Sly-111155	Solanum lycopersicum	37.39	2.00e-53	204.00
IUUC-Stu-112166	Solanum tuberosum	32.23	1.00e-49	191.00
IUUC-Sar-113251	Sorex araneus	88.45	0.00e+00	2543.00
IUUC-Sbi-114352	Sorghum bicolor	32.26	1.00e-45	177.00
IUUC-Tgu-116554	Taeniopygia guttata	92.40	0.00e+00	8413.00
IUUC-Tru-118695	Takifugu rubripes	81.03	0.00e+00	7485.00
IUUC-Tsy-119647	Tarsius syrichta	91.87	0.00e+00	5711.00
IUUC-Tni-120707	Tetraodon nigroviridis	81.16	0.00e+00	7448.00
IUUC-Tca-121094	Theobroma cacao	35.36	1.00e-51	198.00
IUUC-Tae-124157	Triticum aestivum	31.82	4.00e-45	176.00
IUUC-Tur-126300	Triticum urartu	35.67	2.00e-49	191.00
IUUC-Tbe-127346	Tupaia belangeri	90.22	0.00e+00	2609.00
IUUC-Ttr-128542	Tursiops truncatus	94.84	0.00e+00	6032.00
IUUC-Vpa-130611	Vicugna pacos	98.14	0.00e+00	4046.00
IUUC-Xtr-131933	Xenopus tropicalis	85.20	0.00e+00	7703.00
IUUC-Xma-134216	Xiphophorus maculatus	77.54	0.00e+00	6943.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence