iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007163

UUCD1 version

UUC-ArT-01074

Ensembl Protein ID

AT5G58580.1

UniProt Accession

Q9LUZ9; Q4PSB0; ATL63_ARATH

Genbank Protein ID

BAA97327.1; AED97072.1; AAY78870.1

Protein Name

RING-H2 finger protein ATL63; Protein ARABIDOPSIS TOXICOS EN LEVADURA 63; RING-type E3 ubiquitin transferase ATL63

Genbank Nucleotide ID

AB020755; CP002688; DQ056726

Gene Name

ATL63; At5g58580; MZN1.3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G58580	AT5G58580.1	AT5G58580.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.70e-07	30.3	138	180

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg...plvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl   + g    ++ +CgH fh +C+ +w       s + +CPlCr
   Q: 138  CVICLGLWEAGdfgRKLRNCGHGFHVECIDMW------LSSHSTCPLCR 180
           999*886644422123446*************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MSEEDGGSMS VKSSLSSFLK ILSSYNSNVL LAALVFLLLV VLFVLLLHFY ARFFWSPSHQ 60
DFSAAARHRR RRRRNRRRTV TTTRIIPSLP LGGFDDGVSS PAATATRDDK GLDSSVISSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGTTTATTAT ATAAAGGAAA ACGACTAATA TATTTCTTTC ATTTTTGTTC GTAATATGCG 60
TAATTTTGAT TATCCCTATA CTATACACTT TTACTCTAGA CACATGTATA TAGTTGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0808--Transferase
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0005769--C:early endosome
GO:0005768--C:endosome
GO:0005798--C:Golgi-associated vesicle
GO:0016021--C:integral component of membrane
GO:0005886--C:plasma membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0008270--F:zinc ion binding
GO:0071470--P:cellular response to osmotic stress
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0030100--P:regulation of endocytosis
GO:1903426--P:regulation of reactive oxygen species biosynthetic process
GO:1901000--P:regulation of response to salt stress

KEGG

ath:AT5G58580

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005886	Arabidopsis lyrata	79.55	1.00e-66	245.00
IUUC-Bol-016350	Brassica oleracea	69.53	4.00e-54	204.00
IUUC-Bra-016698	Brassica rapa	69.79	4.00e-68	250.00
IUUC-Gma-043667	Glycine max	58.89	3.00e-22	98.20
IUUC-Mtr-058692	Medicago truncatula	59.04	1.00e-22	99.40
IUUC-Pop-099382	Populus trichocarpa	49.21	9.00e-24	102.00
IUUC-Spo-108234	Schizosaccharomyces pombe	44.90	2.00e-08	53.90
IUUC-Sly-111499	Solanum lycopersicum	59.30	1.00e-21	95.10
IUUC-Stu-112903	Solanum tuberosum	64.00	1.00e-21	94.70

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence