iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017477

Ensembl Protein ID

Bra022370.1-P

UniProt Accession

M4E0S3; M4E0S3_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra022370	Bra022370.1	Bra022370.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.70e-07	31.2	164	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl +f++g  +++lp C H+fh++C+  w       + + +CPlCr
   Q: 164  CAVCLLEFEEGdyVRTLPlCFHAFHLECIDEW------LRSHPNCPLCR 206
           ********66666999****************......**********8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRFAAPPPRS GDISPSPSPA ASPSLSPYSG VPEEILSPSS DPPLQFSPPL IAMVVVLAAA 60
FLFVTYSRLI SRRFLSPLFR RFRRWRHRRR RLLHLSSASN SSSDLRSFSP FPFDSFHYSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGATTCG CGGCACCACC CCCGCGCTCC GGCGATATCT CACCTTCTCC TTCGCCAGCT 60
GCTTCACCGT CTCTTTCACC GTATTCAGGA GTACCAGAGG AGATTCTTTC TCCTTCCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002525	Amborella trichopoda	45.13	4.00e-48	184.00
IUUC-Aly-005738	Arabidopsis lyrata	79.61	6.00e-117	413.00
IUUC-Ath-006761	Arabidopsis thaliana	80.79	2.00e-118	418.00
IUUC-Bdi-014398	Brachypodium distachyon	35.74	5.00e-26	111.00
IUUC-Bol-015520	Brassica oleracea	96.64	2.00e-164	571.00
IUUC-Gma-043732	Glycine max	49.87	7.00e-63	234.00
IUUC-Lpe-051662	Leersia perrieri	35.29	1.00e-18	87.40
IUUC-Mtr-058344	Medicago truncatula	46.89	8.00e-64	237.00
IUUC-Mac-065095	Musa acuminata	53.57	3.00e-21	95.10
IUUC-Ogu-077985	Oryza glumaepatula	34.64	1.00e-17	83.60
IUUC-Oin-079093	Oryza indica	38.10	8.00e-16	77.80
IUUC-Opu-083940	Oryza punctata	33.84	2.00e-18	87.00
IUUC-Oru-084986	Oryza rufipogon	32.38	2.00e-09	56.60
IUUC-Olu-087781	Ostreococcus lucimarinus	50.00	1.00e-13	68.90
IUUC-Pop-099495	Populus trichocarpa	48.75	1.00e-61	230.00
IUUC-Ppe-101726	Prunus persica	48.25	6.00e-68	251.00
IUUC-Sit-109801	Setaria italica	32.94	1.00e-21	97.40
IUUC-Sly-111253	Solanum lycopersicum	49.07	6.00e-52	197.00
IUUC-Stu-112012	Solanum tuberosum	49.23	7.00e-52	197.00
IUUC-Sbi-114003	Sorghum bicolor	33.33	2.00e-18	87.00
IUUC-Tca-120931	Theobroma cacao	52.21	1.00e-73	270.00
IUUC-Tae-123946	Triticum aestivum	39.49	2.00e-23	102.00
IUUC-Vvi-131492	Vitis vinifera	51.47	1.00e-68	253.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence