iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057789

Ensembl Protein ID

KEH20738

UniProt Accession

A0A072TV41; A0A072TV41_MEDTR

Genbank Protein ID

KEH20738.1

Protein Name

Transducin/WD40 repeat protein

Genbank Nucleotide ID

CM001224

Gene Name

MTR_8g089650

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_8g089650	KEH20738	KEH20738

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.60e-27	95.1	211	246

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    HtdsvtclafsdtllvsGsdDgtikvWDlrtgvllk 37
           H+d vt+la s++ + s s+D+t+k+W++++ ++l 
   Q: 211  HADAVTDLAVSNGVIYSVSWDKTLKIWRISDLRCLE 246
           99********66*****************9999986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MRLRWLLDTC SSANNCATAT HNSTISLHPS KKQQHASDSS TSSSSTLTSD DSTSTLYSNY 60
SIQTLPSVPS LQKLSSQNLN NFSVSYHCIT SLTPHSSRPI TSLALHNNLL YAATENQINV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTAACTGC ACCAAATAAT ACCGATCTTC GAACAGTAGT ACAGTTCTAC TCATTATAAA 60
CGAGATACAA TTCTAGTGGA CGATACCTCA ACAGCAATAT CGAATTATCC AATAATAACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005886--C:plasma membrane

KEGG

mtr:MTR_8g089650

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002783	Amborella trichopoda	50.52	2.00e-97	348.00
IUUC-Aly-006280	Arabidopsis lyrata	63.09	6.00e-130	456.00
IUUC-Ath-006951	Arabidopsis thaliana	62.53	8.00e-130	456.00
IUUC-Bdi-015036	Brachypodium distachyon	47.18	5.00e-53	201.00
IUUC-Bol-015495	Brassica oleracea	61.78	6.00e-118	416.00
IUUC-Bra-016742	Brassica rapa	60.88	3.00e-106	377.00
IUUC-Gma-043162	Glycine max	74.72	1.00e-165	575.00
IUUC-Mac-065257	Musa acuminata	51.54	4.00e-94	337.00
IUUC-Olu-087837	Ostreococcus lucimarinus	30.77	2.00e-27	115.00
IUUC-Pop-100092	Populus trichocarpa	67.21	8.00e-138	483.00
IUUC-Ppe-101598	Prunus persica	66.57	2.00e-130	457.00
IUUC-Smo-108947	Selaginella moellendorffii	37.53	1.00e-46	179.00
IUUC-Sly-111566	Solanum lycopersicum	60.39	1.00e-122	432.00
IUUC-Stu-112893	Solanum tuberosum	60.94	1.00e-122	432.00
IUUC-Sbi-114374	Sorghum bicolor	45.79	3.00e-55	208.00
IUUC-Tca-121847	Theobroma cacao	66.57	8.00e-137	479.00
IUUC-Vvi-130905	Vitis vinifera	63.33	8.00e-127	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence