iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ata-000279

Ensembl Protein ID

EMT09556

UniProt Accession

M8B6D8; M8B6D8_AEGTA

Genbank Protein ID

EMT09556.1

Protein Name

RING-H2 finger protein ATL5K

Genbank Nucleotide ID

KD562758

Gene Name

F775_08384

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
F775_08384	EMT09556	EMT09556

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-09	38.0	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f   ++ +++lp C H+fh+dC+ +w         +++CPlCr
   Q: 105  CAVCLSEFqegER-LRLLPpCLHLFHTDCIDAW------LHATANCPLCR 147
           ********55444.888888*************......**********8 PP

Organism

Aegilops tauschii

Protein Sequence
(Fasta)

MGAPGAAPLA GNSFVILSVA VVGILATSLL LLAYYLFLTR CGLASWRRDH DDVVTTTQHH 60
HHIVYSTAPE PSRGLEEAAI RRIPTLRYRE SKQLQAPQAQ AASECAVCLS EFQEGERLRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCGCGC CAGGCGCAGC TCCCCTAGCA GGCAACAGCT TCGTCATCCT CTCCGTCGCC 60
GTCGTCGGCA TCCTCGCCAC CAGCCTCCTC CTCCTCGCCT ACTACCTCTT CCTCACCCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0472--Membrane
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ats:F775_08384

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003120	Amborella trichopoda	35.37	2.00e-27	115.00
IUUC-Aly-006068	Arabidopsis lyrata	35.29	4.00e-34	137.00
IUUC-Ath-006598	Arabidopsis thaliana	36.63	2.00e-35	142.00
IUUC-Bdi-015043	Brachypodium distachyon	57.48	9.00e-57	212.00
IUUC-Bol-016276	Brassica oleracea	33.33	7.00e-35	140.00
IUUC-Bra-017431	Brassica rapa	36.62	7.00e-35	140.00
IUUC-Cpo-022010	Cavia porcellus	54.17	9.00e-11	61.60
IUUC-Gma-044038	Glycine max	37.73	2.00e-31	128.00
IUUC-Hvu-047348	Hordeum vulgare	85.88	6.00e-118	416.00
IUUC-Mtr-057939	Medicago truncatula	38.14	1.00e-30	126.00
IUUC-Oan-073037	Ornithorhynchus anatinus	38.46	3.00e-11	63.20
IUUC-Ome-081367	Oryza meridionalis	37.62	9.00e-24	103.00
IUUC-Pop-098991	Populus trichocarpa	36.00	7.00e-33	133.00
IUUC-Ppe-101210	Prunus persica	36.16	1.00e-30	126.00
IUUC-Sit-110272	Setaria italica	48.78	5.00e-42	163.00
IUUC-Sly-111856	Solanum lycopersicum	35.69	8.00e-37	146.00
IUUC-Stu-111992	Solanum tuberosum	37.56	6.00e-34	137.00
IUUC-Sbi-114476	Sorghum bicolor	33.21	2.00e-24	105.00
IUUC-Tca-121116	Theobroma cacao	37.50	1.00e-36	146.00
IUUC-Tae-124958	Triticum aestivum	99.62	2.00e-123	434.00
IUUC-Tur-126127	Triticum urartu	90.60	2.00e-120	424.00
IUUC-Vvi-131101	Vitis vinifera	36.96	8.00e-34	137.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence