iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095898

Ensembl Protein ID

PP1S15_197V6.1

UniProt Accession

A9RL45; A9RL45_PHYPA

Genbank Protein ID

EDQ80370.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544904

Gene Name

PHYPADRAFT_159747

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S15_197V6	PP1S15_197V6.1	PP1S15_197V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.10e-43	144.2	148	183
UBD/Beta-Prp	4.70e-70	236.9	11	232

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.....sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+c++f     + +++vsG++D+++kvW+l+ +
   Q: 148  HTGWVSCVRFspvtaN-PIIVSGGWDKVVKVWNLTNC 183
           ***********98643.9***************9875 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkl.....lrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkgh 93
           lkgh    +t++++  ++ +l++++srd++i+vw ++++        r+l gh  +v++v +s+dg++ ++gs D+t+++wdl+tg++++ + gh
   Q: 11   LKGHAN-WVTAIACpLDNPDLILSSSRDKSIIVWHLSREEGnygvaRRRLTGHAHFVQDVVISSDGQFALSGSWDGTLRLWDLNTGTTTRRFIGH 104
           555555.566677779999*****************998778899899*********************************************** PP
   S: 94   edsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdg..nllvsGslDrtvrlWdlktgkllrtltgghtdsvy 184
           +++vls++fs ++  +vsGs+d+ti++w++  + c ++    + h+g+v+cv+++p +   ++vsG+ D++v++W+l t++ +rt   ght++v+
   Q: 105  TKDVLSVAFSVDNRQIVSGSRDKTIKLWNTLGE-CKYTiqDVDAHTGWVSCVRFSPVTanPIIVSGGWDKVVKVWNL-TNCKIRTNLVGHTGYVN 197
           ****************************77544.4444224468***********9877579***************.88888888777****** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
            ++++++g  ++sg++dg   lwdl +g+ +++l 
   Q: 198  TVTVSPDGSLCASGGKDGVAMLWDLAEGKRLYSLD 232
           *****************************999876 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MAETLVLRGT LKGHANWVTA IACPLDNPDL ILSSSRDKSI IVWHLSREEG NYGVARRRLT 60
GHAHFVQDVV ISSDGQFALS GSWDGTLRLW DLNTGTTTRR FIGHTKDVLS VAFSVDNRQI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGTCGGCCG TGTGGGGCTA CAAACCCCAT CACGTCTCCG AGATGGGTCT CTCTTTGGAA 60
GTCTGTGAGC AGCGCCGCCT GCCTCAGCTC TTGGCTTTCC AGCCTTCGTC TTTGTTTGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_159747

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002694	Amborella trichopoda	77.14	1.00e-147	514.00
IUUC-Ete-033182	Echinops telfairi	67.12	6.00e-82	296.00
IUUC-Gma-042872	Glycine max	73.77	1.00e-144	504.00
IUUC-Mtr-058808	Medicago truncatula	73.77	3.00e-145	506.00
IUUC-Mac-064447	Musa acuminata	70.68	9.00e-130	455.00
IUUC-Obr-076099	Oryza brachyantha	68.10	3.00e-126	443.00
IUUC-Pop-099345	Populus trichocarpa	74.46	2.00e-144	503.00
IUUC-Pgr-103375	Puccinia graminis	56.05	4.00e-97	347.00
IUUC-Smo-109017	Selaginella moellendorffii	78.30	3.00e-148	516.00
IUUC-Vpa-130410	Vicugna pacos	60.77	1.00e-84	305.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence