iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-051010

Ensembl Protein ID

LPERR09G05820.1

UniProt Accession

A0A0D9XD84; A0A0D9XD84_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR09G05820	LPERR09G05820.1	LPERR09G05820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.30e-24	86.9	289	359

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           p+++ CpI+l++M+dPv++++G+tydr+sI +w++ g +tcPvt+++l   d+vPn +lr ++++ + +n+
   Q: 289  PDALQCPITLDIMTDPVTVSTGQTYDRASITRWMKAGCRTCPVTGERLLTGDVVPNAALRGIVERMLLSNG 359
           899*********************************************************99998887776 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MSSPPPSKPK RRRLLSLPAV YPCEDITPAP LFASLLSLAA DVAGRRVADA DAFPILRRGV 60
RRVVRIAGIL LAFLEELHDA TTSSIPASAV LALTELHVAM QKLRFLLTDV SRRGARLWVL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCGC CGCCGCCGAG CAAGCCGAAG CGCCGGCGTC TCCTCTCTCT TCCGGCGGTC 60
TACCCATGCG AGGACATCAC GCCGGCGCCG CTCTTCGCCT CGCTGCTCTC CCTCGCCGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	68.72	7.00e-168	582.00
IUUC-Atr-002640	Amborella trichopoda	35.82	3.00e-78	285.00
IUUC-Aly-006337	Arabidopsis lyrata	36.34	2.00e-90	326.00
IUUC-Ath-006754	Arabidopsis thaliana	35.86	2.00e-87	316.00
IUUC-Bdi-014095	Brachypodium distachyon	68.90	0.00e+00	748.00
IUUC-Bol-015964	Brassica oleracea	36.51	4.00e-85	308.00
IUUC-Bra-017789	Brassica rapa	35.59	1.00e-78	286.00
IUUC-Gma-043090	Glycine max	37.31	6.00e-100	357.00
IUUC-Hvu-047204	Hordeum vulgare	66.85	0.00e+00	789.00
IUUC-Mtr-058647	Medicago truncatula	36.22	3.00e-102	365.00
IUUC-Mac-064527	Musa acuminata	51.34	4.00e-75	275.00
IUUC-Opr-070458	Ochotona princeps	35.48	7.00e-09	53.90
IUUC-Obr-076695	Oryza brachyantha	78.30	3.00e-158	551.00
IUUC-Ogl-076995	Oryza glaberrima	76.48	0.00e+00	739.00
IUUC-Oin-079752	Oryza indica	76.68	0.00e+00	755.00
IUUC-Ome-081268	Oryza meridionalis	75.57	0.00e+00	771.00
IUUC-Oni-082928	Oryza nivara	76.89	0.00e+00	740.00
IUUC-Opu-084107	Oryza punctata	79.14	0.00e+00	791.00
IUUC-Oru-084651	Oryza rufipogon	76.74	0.00e+00	740.00
IUUC-Osa-085940	Oryza sativa	76.74	0.00e+00	740.00
IUUC-Pop-099290	Populus trichocarpa	39.08	7.00e-112	397.00
IUUC-Ppe-102097	Prunus persica	39.02	1.00e-109	389.00
IUUC-Sit-110113	Setaria italica	72.58	0.00e+00	789.00
IUUC-Sly-111130	Solanum lycopersicum	36.26	7.00e-102	364.00
IUUC-Stu-112861	Solanum tuberosum	36.46	4.00e-107	381.00
IUUC-Sbi-114188	Sorghum bicolor	69.68	0.00e+00	768.00
IUUC-Tca-121206	Theobroma cacao	39.70	2.00e-121	429.00
IUUC-Tae-125504	Triticum aestivum	66.85	0.00e+00	787.00
IUUC-Tur-126514	Triticum urartu	64.46	0.00e+00	647.00
IUUC-Vvi-130884	Vitis vinifera	40.75	5.00e-115	407.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence