iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112861

Ensembl Protein ID

PGSC0003DMT400062931

UniProt Accession

M1C9T1; M1C9T1_SOLTU

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400024491	PGSC0003DMT400062931	PGSC0003DMT400062931

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.70e-31	108.7	277	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           pe+f+CpIslelM+dPv++++G+tydr+sI+kwl+sg+  cP+t+++l++++lvPn +lr+liq++c++n++
   Q: 277  PEDFRCPISLELMTDPVTVSTGQTYDRASIHKWLKSGNLLCPKTGETLQSTELVPNSSLRNLIQQFCADNGI 348
           89******************************************************************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MIQRFDRNDR RILTFPAVHP CEGISPATLL DSLITLSQGI CTFKSKFFPS QRRNVREMIR 60
QVGILLIFFE EIRDHLPSDR DSIVLCFAEL HTTFQKIKFL LDDCMREGAK TWMLMKSHSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTTGTTAA CTTTCTCAAA TGAAAAAAAA CAGAGCTCAT TAACACATCA AATTCAAACA 60
TTAAACTATA GTTTTTTTCG ATCGATGATT CAAAGATTTG ATCGGAATGA TCGCCGGATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

sot:102591646

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000617	Aegilops tauschii	37.28	2.00e-92	332.00
IUUC-Atr-002640	Amborella trichopoda	38.98	1.00e-114	405.00
IUUC-Aly-006337	Arabidopsis lyrata	39.54	6.00e-140	490.00
IUUC-Ath-007598	Arabidopsis thaliana	39.77	2.00e-138	484.00
IUUC-Bdi-014095	Brachypodium distachyon	36.96	9.00e-111	393.00
IUUC-Bol-015352	Brassica oleracea	39.53	1.00e-130	459.00
IUUC-Bra-017789	Brassica rapa	39.48	4.00e-130	457.00
IUUC-Cne-026806	Cryptococcus neoformans	32.39	2.00e-05	42.00
IUUC-Gma-043679	Glycine max	57.35	0.00e+00	759.00
IUUC-Hvu-047204	Hordeum vulgare	38.95	2.00e-127	448.00
IUUC-Kpa-049392	Komagataella pastoris	36.49	6.00e-09	53.50
IUUC-Lpe-051010	Leersia perrieri	35.68	2.00e-86	312.00
IUUC-Mtr-058794	Medicago truncatula	58.32	0.00e+00	758.00
IUUC-Mac-064527	Musa acuminata	49.04	7.00e-85	306.00
IUUC-Obr-076695	Oryza brachyantha	39.59	8.00e-74	270.00
IUUC-Ogl-077133	Oryza glaberrima	39.28	4.00e-95	341.00
IUUC-Ogu-078633	Oryza glumaepatula	39.77	2.00e-96	345.00
IUUC-Oin-079248	Oryza indica	39.58	6.00e-96	343.00
IUUC-Ome-081678	Oryza meridionalis	39.28	2.00e-95	342.00
IUUC-Oni-082545	Oryza nivara	39.55	1.00e-96	345.00
IUUC-Opu-083981	Oryza punctata	37.26	3.00e-115	408.00
IUUC-Oru-084317	Oryza rufipogon	39.66	5.00e-97	347.00
IUUC-Osa-085294	Oryza sativa	39.55	2.00e-96	345.00
IUUC-Pop-099290	Populus trichocarpa	60.23	0.00e+00	835.00
IUUC-Ppe-102097	Prunus persica	60.12	0.00e+00	749.00
IUUC-Sit-110113	Setaria italica	38.17	8.00e-122	429.00
IUUC-Sly-111836	Solanum lycopersicum	93.55	0.00e+00	1311.00
IUUC-Sbi-114188	Sorghum bicolor	36.31	1.00e-110	393.00
IUUC-Tca-121206	Theobroma cacao	62.17	0.00e+00	857.00
IUUC-Tae-123313	Triticum aestivum	38.37	1.00e-120	426.00
IUUC-Tur-126514	Triticum urartu	37.35	2.00e-103	368.00
IUUC-Vvi-130884	Vitis vinifera	60.47	0.00e+00	793.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence