iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114024

Ensembl Protein ID

Sb04g024660.1

UniProt Accession

C5XWH2; C5XWH2_SORBI

Genbank Protein ID

EES07083.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000763

Gene Name

SORBI_004G200200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g024660	Sb04g024660.1	Sb04g024660.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/UBA	7.00e-15	55.4	805	842

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/UBA

   S: 3    dedkleqlveMGFdreealqaLraa.nnnleaAveyLl 39
           + ++l++l+eMGFd+ e+ ++L+a  ++++ +Av++L+
   Q: 805  WDPLLAELEEMGFDDTEVNKELLAKnGGSIKRAVMDLI 842
           6799*********8888888888866*********997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSDRSSSAGP TFFPFGPQAE AWDVTFKVKY GDTLKRFYGC ANGNHFDMNL SALRAKIATA 60
FKFGSDADFI LTYTDEDGDI VMLDDDDDLR DAALRQKLNP LRITVQLKKN QPTDKKDVSA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGCATCGACA CTCGACACGC ACCGCCCCCG CCACCACCAC AAGCTGCGGC TCACGGCTAC 60
GCAGCCCGCT CTCCCGCGAC TCCCCCGTCC CCTCCTCCTC CTCTCCTTCC TACTAGCACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR032350--N_BRCA1_central
IPR000270--PB1_dom
IPR015940--UBA
IPR009060--UBA-like
IPR000433--Znf_ZZ

PROSITE

PS51745--PB1
PS50030--UBA
PS50135--ZF_ZZ_2

Pfam

PF16158--N_BRCA1_IG
PF00564--PB1
PF00569--ZZ

SMART

SM00666--PB1
SM00291--ZnF_ZZ

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

sbi:SORBI_04g024660

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003106	Amborella trichopoda	46.08	3.00e-54	206.00
IUUC-Apl-003851	Anas platyrhynchos	40.71	4.00e-16	79.70
IUUC-Bgr-011970	Blumeria graminis	30.53	4.00e-14	73.20
IUUC-Bdi-014744	Brachypodium distachyon	57.58	0.00e+00	769.00
IUUC-Bol-015840	Brassica oleracea	43.78	7.00e-96	343.00
IUUC-Bra-016895	Brassica rapa	53.75	7.00e-72	264.00
IUUC-Cho-024901	Choloepus hoffmanni	39.62	2.00e-14	73.20
IUUC-Cme-027152	Cyanidioschyzon merolae	38.10	9.00e-08	51.20
IUUC-Dme-031659	Drosophila melanogaster	45.71	4.00e-07	48.90
IUUC-Fal-037400	Ficedula albicollis	41.59	2.00e-16	81.30
IUUC-Gga-040430	Gallus gallus	40.50	9.00e-17	81.60
IUUC-Gma-044280	Glycine max	49.20	4.00e-73	268.00
IUUC-Hvu-047467	Hordeum vulgare	59.17	0.00e+00	834.00
IUUC-Itr-048172	Ictidomys tridecemlineatus	39.09	5.00e-15	75.90
IUUC-Lpe-051565	Leersia perrieri	56.08	0.00e+00	811.00
IUUC-Mcc-055768	Macaca mulatta	39.09	5.00e-15	76.30
IUUC-Mtr-058592	Medicago truncatula	51.44	3.00e-73	269.00
IUUC-Mla-059018	Melampsora laricipopulina	37.17	2.00e-20	89.40
IUUC-Mga-059507	Meleagris gallopavo	40.68	1.00e-16	81.30
IUUC-Mvi-060452	Microbotryum violaceum	32.68	2.00e-19	90.50
IUUC-Mac-064456	Musa acuminata	48.84	1.00e-104	373.00
IUUC-Oba-075551	Oryza barthii	58.90	0.00e+00	802.00
IUUC-Obr-076023	Oryza brachyantha	59.91	0.00e+00	686.00
IUUC-Ogl-076946	Oryza glaberrima	58.90	0.00e+00	802.00
IUUC-Ogu-078367	Oryza glumaepatula	58.68	0.00e+00	798.00
IUUC-Oin-079583	Oryza indica	58.68	0.00e+00	798.00
IUUC-Olo-080331	Oryza longistaminata	58.95	0.00e+00	791.00
IUUC-Ome-081656	Oryza meridionalis	57.99	0.00e+00	784.00
IUUC-Oni-082599	Oryza nivara	58.90	0.00e+00	802.00
IUUC-Opu-083123	Oryza punctata	59.12	0.00e+00	820.00
IUUC-Oru-085241	Oryza rufipogon	55.10	0.00e+00	717.00
IUUC-Osa-085500	Oryza sativa	58.68	0.00e+00	798.00
IUUC-Olu-087872	Ostreococcus lucimarinus	37.25	2.00e-10	60.10
IUUC-Psi-093398	Pelodiscus sinensis	41.59	2.00e-16	80.90
IUUC-Pma-094658	Petromyzon marinus	39.64	3.00e-16	77.80
IUUC-Pno-095009	Phaeosphaeria nodorum	37.40	1.00e-16	81.60
IUUC-Ppa-095723	Physcomitrella patens	34.52	2.00e-72	266.00
IUUC-Pop-099441	Populus trichocarpa	45.03	6.00e-95	340.00
IUUC-Ppe-101351	Prunus persica	52.48	8.00e-72	264.00
IUUC-Pte-104190	Pyrenophora teres	33.33	1.00e-14	74.70
IUUC-Pyt-104763	Pyrenophora triticirepentis	33.59	5.00e-15	75.90
IUUC-Sha-106861	Sarcophilus harrisii	39.25	8.00e-15	75.50
IUUC-Sja-108012	Schizosaccharomyces japonicus	27.52	1.00e-06	47.00
IUUC-Smo-109175	Selaginella moellendorffii	50.91	1.00e-22	99.00
IUUC-Sit-110140	Setaria italica	77.16	0.00e+00	1136.00
IUUC-Sly-111022	Solanum lycopersicum	42.15	7.00e-93	334.00
IUUC-Stu-111924	Solanum tuberosum	53.88	5.00e-70	258.00
IUUC-Sar-113740	Sorex araneus	39.09	7.00e-15	75.50
IUUC-Ssc-116108	Sus scrofa	39.09	5.00e-15	76.30
IUUC-Tgu-117185	Taeniopygia guttata	40.16	6.00e-17	82.40
IUUC-Tru-117980	Takifugu rubripes	35.19	8.00e-17	82.00
IUUC-Tsy-119265	Tarsius syrichta	40.37	2.00e-15	75.90
IUUC-Tca-120994	Theobroma cacao	50.00	2.00e-72	266.00
IUUC-Tae-125780	Triticum aestivum	59.82	0.00e+00	839.00
IUUC-Tur-126775	Triticum urartu	56.61	0.00e+00	784.00
IUUC-Vda-129911	Verticillium dahliae	44.12	4.00e-03	35.80
IUUC-Vvi-131325	Vitis vinifera	44.25	9.00e-93	334.00
IUUC-Xma-134007	Xiphophorus maculatus	37.50	5.00e-11	62.80
IUUC-Yli-134387	Yarrowia lipolytica	55.88	8.00e-07	47.80

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence