iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095874

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS544911

Gene Name

PHYPADRAFT_24385

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S22_112V6	PP1S22_112V6.1	PP1S22_112V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.80e-21	73.9	430	457

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd..tllvsGsdDgtikvWD 29
           +++++++  d  +l++s+sdDgt+++WD
   Q: 430  RIWSIDYsKDfpDLIASASDDGTVRMWD 457
           69999999455599************** PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MIAIIGEGQK VAVESNSRCG TSVSCLGGSC RGEIAVQIVA SGDHFFTNSS SGDDVVSATS 60
SFLGTPRLPL YDSFRSSLNN QCRFSFKRTR LGVSSSVNRH KRRKIELEEK SVGLTSSVHD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCGCCA TCATCGGGGA AGGTCAGAAG GTGGCGGTTG AGTCCAATTC AAGATGTGGG 60
ACATCAGTAT CGTGCTTGGG AGGAAGTTGT CGGGGAGAGA TTGCAGTTCA AATCGTGGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_24385

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002851	Amborella trichopoda	35.41	1.00e-60	226.00
IUUC-Aly-005431	Arabidopsis lyrata	35.95	2.00e-61	228.00
IUUC-Ath-006872	Arabidopsis thaliana	37.56	7.00e-58	216.00
IUUC-Bra-016672	Brassica rapa	38.62	3.00e-63	234.00
IUUC-Cre-022579	Chlamydomonas reinhardtii	37.39	8.00e-37	146.00
IUUC-Pop-099510	Populus trichocarpa	36.41	3.00e-68	251.00
IUUC-Smo-109171	Selaginella moellendorffii	42.37	2.00e-75	275.00
IUUC-Stu-112915	Solanum tuberosum	35.25	1.00e-65	242.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence