iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-058641

Ensembl Protein ID

KEH43017

UniProt Accession

A0A072VMG8; A0A072VMG8_MEDTR

Genbank Protein ID

KEH43017.1

Protein Name

Auxin-induced protein

Genbank Nucleotide ID

CM001217

Gene Name

MTR_1g080860

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_1g080860	KEH43017	KEH43017
MTR_1g080860	KEH43016	KEH43016

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	1.00e-16	62.3	137	234

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           +vkvs++g+++++++dl+ + ++++L +a+++ +                         l++s++ ++YeD+dGD++ l++D++++++v+      s++rl
   Q: 137  FVKVSMDGAPYLRKVDLKLYKSYQELSDALAKmFSsftidncgsqvtkdfmnesklidLLNGSDYVPTYEDKDGDWM-LVGDVPWEMFVQ------SCKRL 230
           8*******************************6225669999***************99999***************.************......***** PP
   S: 80   liqk 83
           +i+k
   Q: 231  RIMK 234
           ***8 PP

Organism

Medicago truncatula

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MTNVGDAERD KYSLINFEET ELRLGLPGAG DHGESPVKNS CGKRGFSETA NVDLKLNLSP 60
INDSASSSST IASVAENKGK DTTTSATVSP PPRAKAQVVG WPPVRSFRKN IVNVHQKSNS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCTCATTTT CCCGACAAAT CCCCTTATAA TCCAACCATT AAAACCCATA CACGTGTCAA 60
CATCTCCATC CATATGGTTC CCTCATACCC CTTCACCAAA TATATCACCA AAACCATCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000264	Aegilops tauschii	59.15	1.00e-49	188.00
IUUC-Atr-002559	Amborella trichopoda	61.73	1.00e-76	278.00
IUUC-Aly-006188	Arabidopsis lyrata	63.60	3.00e-71	260.00
IUUC-Ath-007356	Arabidopsis thaliana	64.00	6.00e-75	272.00
IUUC-Bdi-014859	Brachypodium distachyon	58.56	1.00e-69	255.00
IUUC-Bol-016371	Brassica oleracea	64.08	1.00e-75	275.00
IUUC-Bra-016936	Brassica rapa	63.27	7.00e-75	272.00
IUUC-Gma-043010	Glycine max	73.06	4.00e-89	320.00
IUUC-Lpe-050724	Leersia perrieri	47.01	1.00e-42	165.00
IUUC-Mac-064520	Musa acuminata	65.14	2.00e-73	268.00
IUUC-Obr-076745	Oryza brachyantha	57.92	8.00e-69	252.00
IUUC-Ogl-077429	Oryza glaberrima	52.16	5.00e-62	229.00
IUUC-Ogu-078911	Oryza glumaepatula	54.84	1.00e-68	252.00
IUUC-Olo-080519	Oryza longistaminata	55.56	4.00e-43	166.00
IUUC-Ome-081785	Oryza meridionalis	56.97	1.00e-46	178.00
IUUC-Opu-083338	Oryza punctata	60.49	3.00e-47	181.00
IUUC-Oru-084731	Oryza rufipogon	60.49	7.00e-47	179.00
IUUC-Ppa-095740	Physcomitrella patens	41.34	9.00e-33	134.00
IUUC-Pop-099218	Populus trichocarpa	69.70	2.00e-88	317.00
IUUC-Sit-110063	Setaria italica	60.46	7.00e-75	273.00
IUUC-Sly-111769	Solanum lycopersicum	68.60	4.00e-88	316.00
IUUC-Stu-112038	Solanum tuberosum	67.19	4.00e-84	303.00
IUUC-Sbi-114725	Sorghum bicolor	77.25	2.00e-67	248.00
IUUC-Tca-121532	Theobroma cacao	69.32	1.00e-90	325.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence