iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Tca-121320

Ensembl Protein ID

EOX93873

UniProt Accession

A0A061DV39; A0A061DV39_THECC

Genbank Protein ID

EOX93873.1

Protein Name

RING/U-box superfamily protein, putative

Genbank Nucleotide ID

CM001879

Gene Name

TCM_002857

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
TCM_002857	EOX93873	EOX93873

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.60e-07	31.6	153	191

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iC+ ++ +  ++++CgH+f++ C+++          + +CP+Cr
   Q: 153  CPICMGPLVE-EMSTRCGHIFCKACIKAA------IAAQGKCPTCR 191
           ********88.456************999......9*********8 PP

Organism

Theobroma cacao

Protein Sequence
(Fasta)

MSTLEVRGPS LRGYRRRKAV LDLNVPPSEI REQEGTSQQA GSEELTSQPL PPVPPATIDV 60
EAFDDDVIES SARAFAEAKN NSRRSRGRTV LVDLDSGQLA RSTNNNHNRR RRLPPSQTVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTAGCCTG GATTTTGAGG TACTATTTTT AATCTCTGAT ACACTCGCTC TCTCTCGCTC 60
TCTCATATTT GTTCTTACTT TTCTCATCTC GTGTTGATTC AATGTATTGG TGTTCTGATC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG

tcc:TCM_002857

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000620	Aegilops tauschii	37.72	2.00e-14	71.60
IUUC-Atr-002771	Amborella trichopoda	38.89	2.00e-15	75.10
IUUC-Aly-006041	Arabidopsis lyrata	56.52	2.00e-31	127.00
IUUC-Ath-007007	Arabidopsis thaliana	56.52	1.00e-30	125.00
IUUC-Bdi-014655	Brachypodium distachyon	58.93	2.00e-12	65.50
IUUC-Bol-015546	Brassica oleracea	42.92	1.00e-23	102.00
IUUC-Bra-016991	Brassica rapa	50.94	6.00e-26	109.00
IUUC-Dme-032177	Drosophila melanogaster	46.67	8.00e-09	53.50
IUUC-Gma-043026	Glycine max	57.55	1.00e-41	161.00
IUUC-Hvu-047630	Hordeum vulgare	37.57	2.00e-16	78.60
IUUC-Lpe-050920	Leersia perrieri	66.67	6.00e-14	70.10
IUUC-Mtr-058638	Medicago truncatula	48.79	1.00e-35	142.00
IUUC-Mac-064624	Musa acuminata	38.13	8.00e-27	112.00
IUUC-Oba-075460	Oryza barthii	69.35	7.00e-17	80.10
IUUC-Obr-076349	Oryza brachyantha	64.91	2.00e-13	68.60
IUUC-Ogl-077094	Oryza glaberrima	69.35	7.00e-17	79.70
IUUC-Ogu-078677	Oryza glumaepatula	69.35	6.00e-17	80.10
IUUC-Oin-079992	Oryza indica	69.35	7.00e-17	79.70
IUUC-Olo-080257	Oryza longistaminata	70.97	4.00e-17	80.50
IUUC-Ome-081943	Oryza meridionalis	69.35	1.00e-16	80.10
IUUC-Oni-082671	Oryza nivara	69.35	7.00e-17	80.10
IUUC-Opu-083644	Oryza punctata	67.74	1.00e-16	79.30
IUUC-Oru-084650	Oryza rufipogon	69.35	7.00e-17	80.10
IUUC-Osa-086110	Oryza sativa	69.35	7.00e-17	79.70
IUUC-Olu-087634	Ostreococcus lucimarinus	51.92	9.00e-09	52.40
IUUC-Ptr-091254	Pan troglodytes	37.10	6.00e-07	46.20
IUUC-Pma-094118	Petromyzon marinus	40.85	2.00e-06	42.40
IUUC-Ppa-095567	Physcomitrella patens	53.45	2.00e-11	61.60
IUUC-Pop-099483	Populus trichocarpa	63.51	1.00e-48	185.00
IUUC-Ppe-101755	Prunus persica	60.28	4.00e-31	126.00
IUUC-Smo-109339	Selaginella moellendorffii	44.26	4.00e-08	50.80
IUUC-Sit-109959	Setaria italica	60.71	7.00e-08	50.80
IUUC-Stu-112694	Solanum tuberosum	50.48	7.00e-38	149.00
IUUC-Sbi-114398	Sorghum bicolor	65.45	3.00e-09	54.30
IUUC-Tae-124035	Triticum aestivum	38.92	7.00e-18	83.60
IUUC-Tur-126408	Triticum urartu	38.92	1.00e-17	82.40
IUUC-Vvi-131506	Vitis vinifera	59.71	6.00e-49	186.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence