iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017065

Ensembl Protein ID

Bra018775.1-P

UniProt Accession

M4DQI2; M4DQI2_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra018775	Bra018775.1	Bra018775.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.40e-30	104.3	937	974
UBD/Beta-Prp	1.30e-52	179.9	836	1032

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
           gH + v+c++  s+ +++++++Dgt+k+WD+rt+ ++ 
   Q: 937  GHDAQVSCVKMiSGERVLTAAHDGTVKMWDVRTDMCVS 974
           8*********99999*******************9985 PP

UBD/Beta-Prp

   S: 45   lrslsgheae...........vtavkfspdgk.ilvtgseDrtikvwdls..tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           +r l+gh+++           v+++  ++++  ++++gs+D ++k+wd+s   ++   tlkgh+ +v+++s+++   k+vsGs+d+ + vwd +
   Q: 836  VRVLKGHSGAvtalhsvtrreVYDLVGDREDAgFFISGSTDCLVKIWDPSlrGSELRATLKGHTGTVRAISSDR--AKIVSGSDDQSVIVWDKQ 927
           455555665522222222222444444433326**************766669*********************..****************** PP
   S: 125  tgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           t q le  l+ghd+ v+cv++ + g  + +++ D+tv++Wd++t+ ++ t      +++ s+++d++   l+++++d+  ++wdl++g+ +++l
   Q: 928  TLQLLE-ELKGHDAQVSCVKMIS-GERVLTAAHDGTVKMWDVRTDMCVSTVGR-CSSAILSIEYDDSTGILAAAGRDTIANIWDLRSGRQMHKL 1018
           *****9.**************99.99*************************66.99************************************** PP
   S: 219  nghtdnvksvrfsp 232
           +ght++++s+r+ +
   Q: 1019 KGHTKWIRSIRMVE 1032
           **********9875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGRIFEYFVV CGLGPEMRTL DGDLGFHGLD TNYLPSLLDQ FPPSDHSLYP PPPPQLPTCV 60
LPAGVAFHSS GFVSSDPVSF PRSYPIVLTE GDGAKIFVSC IAFRDRVCED VTEAYQLPPN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGTCGGA TCTTCGAGTA CTTCGTCGTG TGCGGACTGG GTCCCGAGAT GCGCACCCTC 60
GACGGCGATC TCGGATTCCA CGGATTGGAT ACCAATTACT TGCCTTCGCT TCTAGACCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR005112--dDENN_dom
IPR001194--DENN_dom
IPR020472--G-protein_beta_WD-40_rep
IPR005113--uDENN_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50947--DDENN
PS50211--DENN
PS50946--UDENN
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02141--DENN
PF03456--uDENN
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00801--dDENN
SM00799--DENN
SM00800--uDENN
SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002593	Amborella trichopoda	72.03	0.00e+00	1644.00
IUUC-Aly-005508	Arabidopsis lyrata	93.27	0.00e+00	2167.00
IUUC-Ath-007614	Arabidopsis thaliana	93.01	0.00e+00	2197.00
IUUC-Bdi-014863	Brachypodium distachyon	70.20	0.00e+00	1657.00
IUUC-Bol-015997	Brassica oleracea	99.83	0.00e+00	2334.00
IUUC-Gma-042682	Glycine max	73.48	0.00e+00	1761.00
IUUC-Hvu-047377	Hordeum vulgare	78.16	4.00e-150	523.00
IUUC-Lpe-051109	Leersia perrieri	69.60	0.00e+00	1555.00
IUUC-Mpo-057423	Magnaporthe poae	25.56	2.00e-26	113.00
IUUC-Mtr-058651	Medicago truncatula	72.84	0.00e+00	1736.00
IUUC-Mac-065420	Musa acuminata	72.22	0.00e+00	1712.00
IUUC-Oba-075961	Oryza barthii	67.73	0.00e+00	1222.00
IUUC-Obr-076806	Oryza brachyantha	70.60	0.00e+00	1671.00
IUUC-Ogu-078716	Oryza glumaepatula	67.44	0.00e+00	1514.00
IUUC-Oin-079809	Oryza indica	59.21	0.00e+00	1255.00
IUUC-Olo-080386	Oryza longistaminata	66.90	0.00e+00	1570.00
IUUC-Ome-081107	Oryza meridionalis	68.96	0.00e+00	1587.00
IUUC-Oni-082213	Oryza nivara	65.49	0.00e+00	1460.00
IUUC-Opu-083850	Oryza punctata	66.07	0.00e+00	1441.00
IUUC-Oru-084982	Oryza rufipogon	69.51	0.00e+00	1528.00
IUUC-Osa-086141	Oryza sativa	71.20	0.00e+00	1641.00
IUUC-Olu-087744	Ostreococcus lucimarinus	31.87	9.00e-38	152.00
IUUC-Ppa-095259	Physcomitrella patens	52.72	0.00e+00	1224.00
IUUC-Pop-099233	Populus trichocarpa	76.64	0.00e+00	1793.00
IUUC-Ppe-101883	Prunus persica	73.46	0.00e+00	1407.00
IUUC-Smo-109566	Selaginella moellendorffii	57.17	0.00e+00	1344.00
IUUC-Sit-109736	Setaria italica	71.03	0.00e+00	1687.00
IUUC-Sly-111483	Solanum lycopersicum	72.53	0.00e+00	1739.00
IUUC-Sbi-113820	Sorghum bicolor	70.94	0.00e+00	1678.00
IUUC-Sre-114901	Sporisorium reilianum	29.91	5.00e-27	117.00
IUUC-Tca-121657	Theobroma cacao	77.11	0.00e+00	1805.00
IUUC-Tae-124598	Triticum aestivum	69.02	0.00e+00	1645.00
IUUC-Tur-126080	Triticum urartu	68.22	0.00e+00	1057.00
IUUC-Uma-129449	Ustilago maydis	30.67	4.00e-28	120.00
IUUC-Vvi-131550	Vitis vinifera	75.92	0.00e+00	1760.00
IUUC-Yli-134429	Yarrowia lipolytica	33.78	6.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence