iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111471

Ensembl Protein ID

Solyc03g113850.1.1

UniProt Accession

K4BKN7; K4BKN7_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc03g113850.1	Solyc03g113850.1.1	Solyc03g113850.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-25	89.4	182	219

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v++la+ ++  +l s s+D t+k+W+++++++l 
   Q: 182  HVDTVSALALsNNkSFLYSVSWDRTLKIWRTSDFKCLE 219
           99********977899******************9986 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MMPFYQTSCS RNSSKAEQEK PTSLDSQPSF RSVPSIKSLC HDQSFSRNLE TQHQCIANLK 60
GQNSYTSSLV LGGKFLFTGS SDKEICMWEQ KALTSTIDAS IIDTVIAGEG AVKSLVILAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGCCTT TTTACCAAAC ATCATGTTCA AGAAATAGCT CAAAAGCAGA ACAAGAAAAG 60
CCAACTTCTT TAGATTCACA GCCAAGTTTT CGTTCAGTTC CTTCAATCAA GTCACTATGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005752	Arabidopsis lyrata	51.65	5.00e-107	380.00
IUUC-Ath-006904	Arabidopsis thaliana	55.37	8.00e-105	372.00
IUUC-Bra-017764	Brassica rapa	54.50	8.00e-103	366.00
IUUC-Csv-026163	Ciona savignyi	26.69	8.00e-18	84.70
IUUC-Gma-043330	Glycine max	57.69	1.00e-120	425.00
IUUC-Mtr-058389	Medicago truncatula	60.92	2.00e-107	382.00
IUUC-Pop-099181	Populus trichocarpa	60.47	5.00e-122	430.00
IUUC-Ppe-101853	Prunus persica	63.74	3.00e-126	444.00
IUUC-Stu-112792	Solanum tuberosum	91.77	0.00e+00	724.00
IUUC-Tca-121089	Theobroma cacao	61.40	2.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence