iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057660

Ensembl Protein ID

KEH35067

UniProt Accession

A0A072UZS8; A0A072UZS8_MEDTR

Genbank Protein ID

KEH35067.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM001219

Gene Name

MTR_3g078340

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_3g078340	KEH35067	KEH35067

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.20e-16	60.6	24	94

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+eflCpI++ lM+dPvv++sG+t++r s++ + + + +    ++++ + ++++ nl+++ +i +wc++ 
   Q: 24   PPKEFLCPITGSLMSDPVVVSSGQTFERLSVQVCTDLNFTPVLQNGTRPDFSTVITNLAIKTTIINWCDKT 94
           79**************************************88888888899999**************986 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MGGNGKHRWK ISFHRSSSQS KQQPPKEFLC PITGSLMSDP VVVSSGQTFE RLSVQVCTDL 60
NFTPVLQNGT RPDFSTVITN LAIKTTIINW CDKTRTVHPP APDYSTVENI VREKMTAATA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATATTAGC TGTCAAAAAA TAAAGAGAAA TAAAAACGTT GAAAGTTTCA GAAACAGCCT 60
CCTCGAAAAA GCACGAAACA ACATGAATAG AAGAAAAGTA AACAAGGCCA ACAACAAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

mtr:MTR_3g078340

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003157	Amborella trichopoda	47.92	2.00e-78	286.00
IUUC-Aly-005887	Arabidopsis lyrata	59.12	2.00e-168	584.00
IUUC-Ath-007165	Arabidopsis thaliana	58.29	3.00e-163	568.00
IUUC-Bdi-014649	Brachypodium distachyon	39.69	4.00e-51	195.00
IUUC-Bol-015998	Brassica oleracea	55.60	3.00e-141	494.00
IUUC-Bra-017987	Brassica rapa	58.81	4.00e-140	490.00
IUUC-Gma-043729	Glycine max	75.14	0.00e+00	765.00
IUUC-Lpe-050893	Leersia perrieri	34.96	9.00e-57	214.00
IUUC-Mac-064560	Musa acuminata	36.91	2.00e-61	229.00
IUUC-Oba-075532	Oryza barthii	45.07	8.00e-38	151.00
IUUC-Ogl-077033	Oryza glaberrima	39.52	1.00e-35	143.00
IUUC-Ogu-078087	Oryza glumaepatula	39.86	5.00e-36	144.00
IUUC-Oin-079818	Oryza indica	38.25	2.00e-33	135.00
IUUC-Olo-080764	Oryza longistaminata	41.74	3.00e-31	128.00
IUUC-Ome-081313	Oryza meridionalis	39.86	4.00e-36	145.00
IUUC-Oni-082747	Oryza nivara	40.21	1.00e-36	147.00
IUUC-Opu-084021	Oryza punctata	42.47	2.00e-40	159.00
IUUC-Oru-084445	Oryza rufipogon	40.21	2.00e-36	147.00
IUUC-Osa-085410	Oryza sativa	39.86	3.00e-36	145.00
IUUC-Ppa-095595	Physcomitrella patens	44.41	2.00e-47	183.00
IUUC-Pop-099467	Populus trichocarpa	65.93	0.00e+00	626.00
IUUC-Ppe-101245	Prunus persica	66.60	3.00e-179	620.00
IUUC-Smo-109005	Selaginella moellendorffii	39.65	3.00e-40	159.00
IUUC-Sit-110079	Setaria italica	45.18	2.00e-40	159.00
IUUC-Sly-111894	Solanum lycopersicum	55.17	4.00e-119	421.00
IUUC-Stu-112202	Solanum tuberosum	55.29	6.00e-129	453.00
IUUC-Sbi-114055	Sorghum bicolor	41.49	4.00e-38	152.00
IUUC-Tca-121713	Theobroma cacao	64.74	2.00e-174	604.00
IUUC-Tae-123306	Triticum aestivum	37.08	7.00e-70	257.00
IUUC-Vvi-131166	Vitis vinifera	63.72	7.00e-175	606.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence