iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Details
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007204

UUCD1 version

UUC-ArT-01425

Ensembl Protein ID

AT5G07270.1

UniProt Accession

Q4FE45; Q9LYN9; XB33_ARATH

Genbank Protein ID

AAZ14070.1; CAB87283.1; AED91131.1; ABK32111.1

Protein Name

E3 ubiquitin-protein ligase XBAT33; Ankyrin repeat domain and RING finger-containing protein XBAT33; Protein XB3 homolog 3; RING-type E3 ubiquitin transferase XBAT33

Genbank Nucleotide ID

DQ086846; AL163652; CP002688; BT029297

Gene Name

XBAT33; At5g07270; T28J14.210

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G07270	AT5G07270.1	AT5G07270.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Reviewed

Details

Family	Domain	References (PMIDs)
E3 activity/RING/RING	RING	15644464; 16461387

Organism

Arabidopsis thaliana

Functional Description
(View)

Possesses E3 ubiquitin-protein ligase activity when associated with the E2 enzyme UBC8 in vitro.

Protein Sequence
(Fasta)

MGNSFGCSAS GERLVSAARD GDFVEAKMLL DCNPCLAKYS TFGGLNSPLH FAAAKGHNEI 60
VGLLLENGAD VNSRNYCGQT ALMQACRYGH WEVVQTLLLF RCNVTRADYL AGRTALHFAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTTATGTTT CGCCTGCATC TTCCTCTGGT CTTTCTTTTT GTCTCAGACG GACAAAACCA 60
GAGAGAGAGA GAGAGAAAGA GAAAAGAGAG TTCGCGTGCT GTTTGAGTAT CATATCTAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0040--ANK repeat
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0677--Repeat
KW-0808--Transferase
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR002110--Ankyrin_rpt
IPR020683--Ankyrin_rpt-contain_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50297--ANK_REP_REGION
PS50088--ANK_REPEAT
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00023--Ank
PF12796--Ank_2

SMART

SM00248--ANK

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0016567--P:protein ubiquitination

KEGG

ath:AT5G07270

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002739	Amborella trichopoda	68.39	0.00e+00	716.00
IUUC-Bdi-014117	Brachypodium distachyon	60.75	2.00e-178	618.00
IUUC-Bol-015213	Brassica oleracea	91.25	0.00e+00	937.00
IUUC-Bra-017326	Brassica rapa	91.84	0.00e+00	943.00
IUUC-Cel-018470	Caenorhabditis elegans	38.20	1.00e-08	52.80
IUUC-Fox-037717	Fusarium oxysporum	41.57	4.00e-05	43.90
IUUC-Gma-043527	Glycine max	73.75	0.00e+00	746.00
IUUC-Hvu-047218	Hordeum vulgare	59.64	8.00e-169	585.00
IUUC-Lpe-051247	Leersia perrieri	56.79	3.00e-159	553.00
IUUC-Mtr-058514	Medicago truncatula	73.85	0.00e+00	772.00
IUUC-Mac-065476	Musa acuminata	62.43	0.00e+00	625.00
IUUC-Obr-076182	Oryza brachyantha	61.61	1.00e-176	612.00
IUUC-Ogu-078284	Oryza glumaepatula	58.30	3.00e-161	560.00
IUUC-Oin-079993	Oryza indica	62.08	2.00e-178	618.00
IUUC-Ome-081168	Oryza meridionalis	57.92	1.00e-160	558.00
IUUC-Oni-083064	Oryza nivara	58.11	6.00e-161	559.00
IUUC-Opu-083221	Oryza punctata	58.11	8.00e-161	559.00
IUUC-Oru-084206	Oryza rufipogon	58.11	6.00e-161	559.00
IUUC-Pno-094944	Phaeosphaeria nodorum	28.49	3.00e-05	43.50
IUUC-Ppa-095298	Physcomitrella patens	57.89	8.00e-149	519.00
IUUC-Pop-099259	Populus trichocarpa	75.53	0.00e+00	795.00
IUUC-Ppe-101466	Prunus persica	75.38	0.00e+00	784.00
IUUC-Smo-109436	Selaginella moellendorffii	51.47	3.00e-141	494.00
IUUC-Sit-110223	Setaria italica	57.77	3.00e-177	614.00
IUUC-Sly-111328	Solanum lycopersicum	73.65	0.00e+00	727.00
IUUC-Stu-112322	Solanum tuberosum	73.65	0.00e+00	724.00
IUUC-Sbi-114176	Sorghum bicolor	58.33	6.00e-178	616.00
IUUC-Tca-120970	Theobroma cacao	76.81	0.00e+00	752.00
IUUC-Tae-124136	Triticum aestivum	61.13	0.00e+00	630.00
IUUC-Vvi-130837	Vitis vinifera	76.29	0.00e+00	799.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence